Detailed information of scaffold57.g15.t1 in Morbakka virulenta

Genomic Location: scaffold57:725496...810899
NR annotation: XP_031570149.1, cadherin EGF LAG seven-pass G-type receptor 1-like isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y5E7Protocadherin beta-2 OS=Homo sapiens OX=9606 GN=PCDHB2 PE=1 SV=1
Q5DRD2Protocadherin beta-2 OS=Pan troglodytes OX=9598 GN=PCDHB2 PE=3 SV=1
Q91XZ2Protocadherin beta-8 OS=Mus musculus OX=10090 GN=Pcdhb8 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19028TSP1_spondinSpondin-like TSP1 domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044004DomainSpondin-like TSP1 domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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