Gene detail

Detailed information of scaffold59.g27.t1 in Morbakka virulenta

Genomic Location: scaffold59:1623428...1668111
NR annotation: XP_047126764.1, solute carrier family 2, facilitated glucose transporter member 3 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold59.g27.t1

ATTGTACTCTTGTTTATTTGAGAGAGAGACCGATTCAGGACCATCTGGATCAAAATCTTTCAAATGAGGAGTGACTATGTCATAGAGATATGGAACTGTGGATACTTGAAGGCATTTAACCACTCTTAAAGTAAGACGTTCACTATTTATTGACATGGAGGACAATGAGAAGGAAATATCTTTTATACAGGAAGGAACAGTTTCAAAAGAAAATCTAGTGAATAATGGAAAAAAGAACAAAGTGACAGGCTTTCTTATTTTGACAACTGTTACATGTTTTGCTGGGTCATCTTTCCAGTTTGGTTATAATCTTGGAGTTGTAAATGCACCATCACAGGTCATTGAACAATACTTTTCAGGTGTACCAAACTTTAAGAGTTGGATATGGCCAAGTGCAGTTGCTTTGTTCAGTGTAGGAGGCATGTTTGGAGCTCTTGTAGGACCACATATTGCAAGAAGGTTTGGAAGGAAAAAGACTTTAATGGCAAACAATGCTTTTGCAATTGTTGGTGGCATACTTTTGCTGATTACAAAGATGACCCATTCAGTTTCACTTCTGATTATTGGGCGGCTTTTGGTTGGGGTAAATGCAGGCTGTAACACTGTCGTTGCACCAATGTATTTATCCGAAGTTGCACCTGTTAATCTTCGAGGTTCTCTTGGAACACTCAATCAGTTTGGTATTGTTTCTGGTATACTTATATCTCAAGTTCTGGGGCTAGATAAGGTGCTTGGCACACCTAATGGATGGCCCTATTTGTTTGGTATTACAGCATTTATTGCTATGGTGCAGCTCATAGTTCTTCCATTTTGCCCAGAGAGTCCACGATACCTTTATATAGGGAAAGGAGAAGTAAATGATGCTAAACAAGTGCTGATAACTCTTCGTGGTGTTGATGATGTTGAAGATGATTTAGCTGAAATGCAGAGGGAAAAAGACGAGGAGGCAGCGGAAGCGAAAGTTTCTATCATTGGCCTTTTTACTGATGCAACCTTACGAAGACCACTTGTTATAAGCGTGGTTCTTCAATTTTCGCAACAACTATCTGGAATAAATGGCGTATTTAACTACTCAACAGACCTTTTCAAGACAGTCCTTAGCCCATCGCAAAGTCAAGCAGCAACTTGTGGCGTTGGACTTATAAGTGTCGTGATGACTGCCATTGTGGTTAAATTGGTAGAGGTTGTTGGAAGGAGAACTCTTTTATTATGGGGACTTGGTGGCATGGTGGTATCATATACAGCAGCGACAATAGCATTTATCTTGGTTGAGGAAGGCTATAACATTGCTCGATACATAGGAGTTGCTTTAACATTGGTCCTTGTGGTGTTCTTTCAACTTGGGCCAGGCCCTATCCCATGGTTTATTGTTGCCGAACTGTTCTCTCAAGGCCCTCTGCCGGCAGCAATCAGTGTTTCAGGAATTGTCAATTGGATATCGGGATTCACTGTTTCTTTTCTGTTCACTGCTATTCAGAAAGGCATCCATCCTTACACATTTTGCCCTTTTATTGTCTTGGTTGCAATCTTTTGGATATTTACTAAAGTATATGTACCTGAGACTAAAGGGAAGACTATCAATGAAGTTAAGAGTATTCTTGAAAATAAAAGGGACTTTGGTTCAACAGAAGAGAAGAAAACAATGGACTGAAGTACTAAGATATGCGCTCATGTAAATTGAAGAAGATGGCGCCTTTTCAACCGAAAGAATTAATTTTGGTCGAGTGCCTTGTATTTTTTTTAATTGTGTTATGTGGCAACAACATTCAGGTCTACGGCCTTGTGTTAGCCACCTGGTAGATGATTTAGGGTTGCATCAGTCAAGTAGGTATGAAATAATGCTGTTTTTGTAAATCTCCATTCCGGATAAATGCCAATGATGACCCCCTTCTGCTTTGTAAAATGTGTTGACCTGTAAAAATTTGAAAAAAGCTGTGTCTTTATTAGAAATAGAAGGAAACTTTCATGTGACTTATTTGGTCCTCAGTGTAAGGAGCAAACAGTTGCTGGTAACAACCAGTAATATATTTCATGTCAGATAGTGCTTGACAGTAAGATGTGCTTTTAAACAGACCGTTCTGGAGATTAATGTCATTTTTGATACGGAATGTGACATAAAAGGTCAAATGTGACATAATTTTGTCAATAAAGGCACAGAAGAGAAAAAAAAAGGAATCTGGGTGAGTTATTAAAACATTCACTTCCAGCATCCCATATATTCGGAAATTAGCTTGGCCCATGCCCTTTTTGTTAAGTAGTATACAGCTCTCCGGAGGAATATGCTTTTGCAGCGGATTTGTAGTTACGGGTTTGGTGAGTAAATCGAGAACACTTTAAGCACAATTTTTTTTACACAGCATAAACAAAAAAAAATATTAACATTTAG

Protein

Uniprot

Uniprot term	Description
P11166	Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens OX=9606 GN=SLC2A1 PE=1 SV=2
P14672	Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens OX=9606 GN=SLC2A4 PE=1 SV=1
P58352	Solute carrier family 2, facilitated glucose transporter member 3 OS=Bos taurus OX=9913 GN=SLC2A3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00083	Sugar_tr	Sugar (and other) transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003663	Family	Sugar/inositol transporter	Interproscan
IPR005828	Family	Major facilitator, sugar transporter-like	Interproscan
IPR045263	Family	Glucose transporter GLUT	Interproscan
IPR005829	Conserved_site	Sugar transporter, conserved site	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23503	SOLUTE CARRIER FAMILY 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0015149	Molecular Function	hexose transmembrane transporter activity	Interproscan
GO:0015749	Biological Process	monosaccharide transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07299	SLC2A1, GLUT1; MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 1	-	Transporters	ko02000	deepkoala