Gene detail

Detailed information of scaffold59.g56.t1 in Morbakka virulenta

Genomic Location: scaffold59:2900987...2969079
NR annotation: XP_041347830.1, uncharacterized protein LOC121367614 [Gigantopelta aegis]

Gene Structure

More details in Jbrowse

Sequence

CDS

scaffold59.g56.t1

ATGCCTCGTTCTGCAGGCAGATCAGACAGGACCAAAATTTTCCAAGCATTAGAAGCTGCACATAAAAGCGATGGAAAAAAACTAAAAAGTAAAAACAGGAGAAAAACTATTTCTGAAGGGAAGAGCTCAAATAAGAATGCGAACTCTGGTATAGAGACACCTGTATATCGAACTAGAAGAAGTGTTCAGATAGAAATAAAATCCACTCATCGAGAATCAACTTGTAAGGATGAGACTGGAAAGTCCAAAAGAATACCTTGCGATGCAACTGGACTTGATGGTTCGCTTTTTGGGGCGTTTGATAGCTCAAATGATAGAACAAACGCCATTTCCAAAGAAAACGTAACCTGCGATGAAATGGGTGGCATGCCCACACCGCGTGTTCCACTGAATCCTGCTTATTTATTAGGGAAAATGCCTCGTTCTGCAGGCAGATCAGACAGGACCAAAATTTTCCAAGCATTAGAAGCTGCACATAAAAGCGATGGAAAAAAACTAAAAAGTAAAAACAGGAGAAAAACTATTTCTGAAGGGAAGAGCTCAAATAAGAATGCGAACTCTGGTATAGAGACACCTGTATATCGAACTAGAAGAAGTGTTCAGATAGAAATAAAATCCACTCATCGAGAATCAACTTGTAAGGATGAGACTGGAAAGTCCAAAAGAATACCTTGCGATGCAACTGGACTTGATGGTTCGCTTTTTGGGGCGTTTGATAGCTCAAATGATAGAACAAACGCCATTTCCAAAGAAAACGTAACCTGCGATGAAATGGGTGGCATGCCCACACCGCGTGTTCCACTGAATCCTGTAAAAAACTGTGACAATATACAAAAAAAATATTTTTCGGAATGTACCCCTGTCGATAGTCTTATAATTAAAGAGCACGATTTAGTACGACAGAATTCTTGTACTGAAAGTATAGATGAAGAGCTGCCTGCAACACAAATAATTGATGACAGACCATTAACAGGGTTATCTGTTATGGTTGATGTGAGAGCAGATAATGAAAACATGTCCCAAGGTGTGATCAGAGAACTTCAGGCACTAGGTGCAAAGttgaataaattctttgacaacgctgcttgtcgcagagaaacaagcatgactgataaaaaaattgatatggaagatttatttgacaaatttttgacagcatttaagcaaactcacgtctgtgttaatgggaaacaagcacagatagaatgttcaaatctatggcgcgaaataaagaaaggaaaagacaatgtttcaataaaatctgaagcacaaaaactcatatcacagtggaaagtaaatgcaaagaagccaggtagaggctcaatcatgaatttttttaccaagccatcctcagcaaagaaaggaaatatatcatcggcatcgtctgatgttgaaattgttgccgaagtctcttctcctcctcctccgtcacaagaaatcactgcttcgactgatgcacttccctcgtcacaacaactcaccgtggcaaatgatccagctcctaagcccagactaactccaaaacaggacgaattaaccaaaaaaattgatattgaaaatgggatattagtgtcactttatcgaaaacgagacttaggacaagactctgaaagtgaccgtaaagaaatttcaactaggaaagcagcacgggaacaactaaagaaagagttgaaagaaactattcaaaacgcatctcgacagaaaaagctacgcgataacaggaaacgtaaactcgaaagcttggatgaaacaacgcgtgaaaagctgatgggcaaggctacttctgatttgggtcgaccggagaagtgtgataagtcggaattgatcaaagttatcagtcgtatagcgatctcaggttccgcagcccatgaccgacgtcgtaacgaagtgattcgaacagtcaagacactagatcagttaacagaagcgttgaatcgcgaagggttcgagttgaaacgctcttctgtgtatcttcatttgttgccccgaaaccatagaacaattgaaggaaaaaggcacgtaaacactgcgcctgttaaactttacaaagctcaaaattcaaagcatgcttcgcatccatcgaagaaatttgctcaggcgacaatcagatcactagaagagctagctgcaattttgggtcctgcagaggtgacatttcattcacaggatgataaagcaaaagtccctattggactaactgctgcaaacaagcaagcacccatggtcatgcacatggagtaccaagtcatgttacctgatcatgattttgttgtagctcctaaacataagctgataccttcggtcattggcgatatgaaggttgtcagaagcaaagatctaaagaatgatgcagtcacctattcaggcgctacatacataggtattagaagtgcaaagcattcaggatcatctgcattcgctcatcttcaagatatgaaacgggtacgctctttacccgaattcgcatcgagttttcaaactgaaaataacgaagagaaaaaggtaatgatagttacagttgatggcggtcctgatgaaaatccaaggtatgaaaatactataaactgttcaattgagtattttgctgaaaatgacctggatgcgctttttgtagcaacaaatgctcccgggcgaagtgcattcaatcgtgttgagcggaggatggttaaacttagcaaagaattaattggtgttatcctggatcatgataaattcggtaaccatcttgatgcgaagggtgtgacggttgacaaagagcttgaaatgaaaaactttgaattcgccggatgcacgctagctgaaatctggtcgggccttgtgatagatggtaaccctgtagttgcggagtttataaaagacgaagcacctgctgttatggtaacaaagtcagaagagtggaaagcaagtcatatgcgacagtcgcaatattttttgcaaattgtaaaatgtttagatgaaaactgttgctcgagttttcgatcatcatacttgaaagttgtccctcaaagatttttgccaccacctatacccattgttcacaccttgaacggaattgaatgggcaaaagatgacaaagatgctacctacttgtcgctgtttcagaatatttcgatgcaaaacaccttgaaacccgatcgagctgcaaaaaaatttcctaaaggaataccatatgattattcctgtccatctgtaaagcaagatgtgattaaaaggcgagtgtgttccaagtgtggtttatacttttcgtcccttaaagcaaagtcaattcatggaggtatttgcagaataaacgaggggcctactcaaaatgaaaccgagcgagtgcgaccattacgaattgctgcccgtcggcaacgggaactgttgtgtgtaatggcctttcaagaaatggagtgggttgcgatggacgacattgatactgaagctcttgaaaattcagaaaatgtggatgaggcagaaaatgactttggtactccaataattgacaccaacgatatagagccaatctgAAGTGAAGATCTCAAACCCCAGATAGGACTCACAATCAATGTTTTACATGTATGCATGATATTTAAGAAAGGTCGAAAGAGCATACTCAGAATAGCAGAAAAGTACAATTTGTATCTTGTCTCGGTTTTATGGGTGGATAGTTGTAAAAACACATGGAAACGGGTTTCAGAGGAAACATTTCCTGCACAAAAGCCGGGATCAGTAGATTCACCTCTCATTCTTGGTAAATTGAAACGTATAAAGTCACTTCAGCCGAGAACATTCACAGAAGACGTTATTCACAGTGGGAAGCGGGAAGCTCGAAAGAAAAGGAAAGAAGCCAAAGGGGAAGATGATTGCAAATATAAGCTGGGCAAGTGCACATTAACCCCAGAGGAAATAACTACACAGCCAAGGCCTTCATTGACAAGCGGCAAACCTACAGTAGCGGATAAAGAGAAGGGTGGTCAAGAAGCCCTAGATCTCACATTTGGTTTTCCTGAAAGTGATGGTGATTTAAAAGCTGAAAATAAATTGGAAAAATTCGAAAGCCCGCAGGACACTAAAAGGAAACATACTAAATCTAACAGCTCTGGAGTGGTTAACACAAAGTATACTAAAACATCAAGGAAGGAAAATAAAGTTCGTTTATTGTCATTGAGTTCTAGTTCTTCAGCGCCAGATGTTTTGACAGAACCTAAAAGTAAGGTCAAGAAAGACTGGAAGTCGGACAAGATCCCTATAGTCTCAAGAGAAAAGAAAAGAAAACGGAAGCAGGAGCGAAGTCCTGAACATAGTAATCTTAAAAAGAGGAAGGCAGTTGACGAAGGCTCAATACCTTCCAATATTGATTCAGAATCACCAAGCAAAGCAAGACATGATTTCTCCGGCGTTTTTAACAACGAAGATAACAGGTCTCCTGTTAAATGTAATGATTCAGAAAAACATTCAAACTCCGAGTCAGAAAATATTCCACTGAGTAAGATAAAGGAACGCTCATTTAAGTATGGAAAGAAGGATAGTGTAGGCTTAGCTGATTTTAAAGAGGATTCCTCTACGACAAGCAAGGAAAGCAGCAGCGAAAGTGACGGCAAACCACCTTCAATTAGAAACAACAAAAAGAATTCTACGTCCAAAGCGCATAGCAAGGTAGCAAAATCCTCTGAAAAAGGAGATTGGGTAGATGAATCAGCGTATGAACTCGGCGAATGGTTTCCTGCGGCCGTAACAAGCAGACAATGTATCCAAGAAGAAAAATTATCTCCTTATGAATCCATGTTCACAAACGCAGGATGGATGTATATAGGGGATAACACAACCCCAACTTTTGAAGATCTTGTCAAGCTTATCGCCAAGTGCGGTGGCCAGGTGACGAATACAACGAGAAAAGCTCGAATATGTATTGGTATAACGAGATGTCGCCAGTTTGAAAGTATCATGGTTCGTGAGAAGTGGGTTCTTGATAGCATATCAAATGGCAGCCTCCTGTCAACCGATCCTTATCTGATAGACAGTGCCGATGAAAGGAAAAGATCACCGAGCCCTGAATTTTAG

Transcript

scaffold59.g56.t1

CCATACACTCTCGGGAACTATGTATTTTAGTTCGTATCTCTTAGGCTTATTTATTAGGGAAAATGCCTCGTTCTGCAGGCAGATCAGACAGGACCAAAATTTTCCAAGCATTAGAAGCTGCACATAAAAGCGATGGAAAAAAACTAAAAAGTAAAAACAGGAGAAAAACTATTTCTGAAGGGAAGAGCTCAAATAAGAATGCGAACTCTGGTATAGAGACACCTGTATATCGAACTAGAAGAAGTGTTCAGATAGAAATAAAATCCACTCATCGAGAATCAACTTGTAAGGATGAGACTGGAAAGTCCAAAAGAATACCTTGCGATGCAACTGGACTTGATGGTTCGCTTTTTGGGGCGTTTGATAGCTCAAATGATAGAACAAACGCCATTTCCAAAGAAAACGTAACCTGCGATGAAATGGGTGGCATGCCCACACCGCGTGTTCCACTGAATCCTGCTTATTTATTAGGGAAAATGCCTCGTTCTGCAGGCAGATCAGACAGGACCAAAATTTTCCAAGCATTAGAAGCTGCACATAAAAGCGATGGAAAAAAACTAAAAAGTAAAAACAGGAGAAAAACTATTTCTGAAGGGAAGAGCTCAAATAAGAATGCGAACTCTGGTATAGAGACACCTGTATATCGAACTAGAAGAAGTGTTCAGATAGAAATAAAATCCACTCATCGAGAATCAACTTGTAAGGATGAGACTGGAAAGTCCAAAAGAATACCTTGCGATGCAACTGGACTTGATGGTTCGCTTTTTGGGGCGTTTGATAGCTCAAATGATAGAACAAACGCCATTTCCAAAGAAAACGTAACCTGCGATGAAATGGGTGGCATGCCCACACCGCGTGTTCCACTGAATCCTGTAAAAAACTGTGACAATATACAAAAAAAATATTTTTCGGAATGTACCCCTGTCGATAGTCTTATAATTAAAGAGCACGATTTAGTACGACAGAATTCTTGTACTGAAAGTATAGATGAAGAGCTGCCTGCAACACAAATAATTGATGACAGACCATTAACAGGGTTATCTGTTATGGTTGATGTGAGAGCAGATAATGAAAACATGTCCCAAGGTGTGATCAGAGAACTTCAGGCACTAGGTGCAAAGttgaataaattctttgacaacgctgcttgtcgcagagaaacaagcatgactgataaaaaaattgatatggaagatttatttgacaaatttttgacagcatttaagcaaactcacgtctgtgttaatgggaaacaagcacagatagaatgttcaaatctatggcgcgaaataaagaaaggaaaagacaatgtttcaataaaatctgaagcacaaaaactcatatcacagtggaaagtaaatgcaaagaagccaggtagaggctcaatcatgaatttttttaccaagccatcctcagcaaagaaaggaaatatatcatcggcatcgtctgatgttgaaattgttgccgaagtctcttctcctcctcctccgtcacaagaaatcactgcttcgactgatgcacttccctcgtcacaacaactcaccgtggcaaatgatccagctcctaagcccagactaactccaaaacaggacgaattaaccaaaaaaattgatattgaaaatgggatattagtgtcactttatcgaaaacgagacttaggacaagactctgaaagtgaccgtaaagaaatttcaactaggaaagcagcacgggaacaactaaagaaagagttgaaagaaactattcaaaacgcatctcgacagaaaaagctacgcgataacaggaaacgtaaactcgaaagcttggatgaaacaacgcgtgaaaagctgatgggcaaggctacttctgatttgggtcgaccggagaagtgtgataagtcggaattgatcaaagttatcagtcgtatagcgatctcaggttccgcagcccatgaccgacgtcgtaacgaagtgattcgaacagtcaagacactagatcagttaacagaagcgttgaatcgcgaagggttcgagttgaaacgctcttctgtgtatcttcatttgttgccccgaaaccatagaacaattgaaggaaaaaggcacgtaaacactgcgcctgttaaactttacaaagctcaaaattcaaagcatgcttcgcatccatcgaagaaatttgctcaggcgacaatcagatcactagaagagctagctgcaattttgggtcctgcagaggtgacatttcattcacaggatgataaagcaaaagtccctattggactaactgctgcaaacaagcaagcacccatggtcatgcacatggagtaccaagtcatgttacctgatcatgattttgttgtagctcctaaacataagctgataccttcggtcattggcgatatgaaggttgtcagaagcaaagatctaaagaatgatgcagtcacctattcaggcgctacatacataggtattagaagtgcaaagcattcaggatcatctgcattcgctcatcttcaagatatgaaacgggtacgctctttacccgaattcgcatcgagttttcaaactgaaaataacgaagagaaaaaggtaatgatagttacagttgatggcggtcctgatgaaaatccaaggtatgaaaatactataaactgttcaattgagtattttgctgaaaatgacctggatgcgctttttgtagcaacaaatgctcccgggcgaagtgcattcaatcgtgttgagcggaggatggttaaacttagcaaagaattaattggtgttatcctggatcatgataaattcggtaaccatcttgatgcgaagggtgtgacggttgacaaagagcttgaaatgaaaaactttgaattcgccggatgcacgctagctgaaatctggtcgggccttgtgatagatggtaaccctgtagttgcggagtttataaaagacgaagcacctgctgttatggtaacaaagtcagaagagtggaaagcaagtcatatgcgacagtcgcaatattttttgcaaattgtaaaatgtttagatgaaaactgttgctcgagttttcgatcatcatacttgaaagttgtccctcaaagatttttgccaccacctatacccattgttcacaccttgaacggaattgaatgggcaaaagatgacaaagatgctacctacttgtcgctgtttcagaatatttcgatgcaaaacaccttgaaacccgatcgagctgcaaaaaaatttcctaaaggaataccatatgattattcctgtccatctgtaaagcaagatgtgattaaaaggcgagtgtgttccaagtgtggtttatacttttcgtcccttaaagcaaagtcaattcatggaggtatttgcagaataaacgaggggcctactcaaaatgaaaccgagcgagtgcgaccattacgaattgctgcccgtcggcaacgggaactgttgtgtgtaatggcctttcaagaaatggagtgggttgcgatggacgacattgatactgaagctcttgaaaattcagaaaatgtggatgaggcagaaaatgactttggtactccaataattgacaccaacgatatagagccaatctgAAGTGAAGATCTCAAACCCCAGATAGGACTCACAATCAATGTTTTACATGTATGCATGATATTTAAGAAAGGTCGAAAGAGCATACTCAGAATAGCAGAAAAGTACAATTTGTATCTTGTCTCGGTTTTATGGGTGGATAGTTGTAAAAACACATGGAAACGGGTTTCAGAGGAAACATTTCCTGCACAAAAGCCGGGATCAGTAGATTCACCTCTCATTCTTGGTAAATTGAAACGTATAAAGTCACTTCAGCCGAGAACATTCACAGAAGACGTTATTCACAGTGGGAAGCGGGAAGCTCGAAAGAAAAGGAAAGAAGCCAAAGGGGAAGATGATTGCAAATATAAGCTGGGCAAGTGCACATTAACCCCAGAGGAAATAACTACACAGCCAAGGCCTTCATTGACAAGCGGCAAACCTACAGTAGCGGATAAAGAGAAGGGTGGTCAAGAAGCCCTAGATCTCACATTTGGTTTTCCTGAAAGTGATGGTGATTTAAAAGCTGAAAATAAATTGGAAAAATTCGAAAGCCCGCAGGACACTAAAAGGAAACATACTAAATCTAACAGCTCTGGAGTGGTTAACACAAAGTATACTAAAACATCAAGGAAGGAAAATAAAGTTCGTTTATTGTCATTGAGTTCTAGTTCTTCAGCGCCAGATGTTTTGACAGAACCTAAAAGTAAGGTCAAGAAAGACTGGAAGTCGGACAAGATCCCTATAGTCTCAAGAGAAAAGAAAAGAAAACGGAAGCAGGAGCGAAGTCCTGAACATAGTAATCTTAAAAAGAGGAAGGCAGTTGACGAAGGCTCAATACCTTCCAATATTGATTCAGAATCACCAAGCAAAGCAAGACATGATTTCTCCGGCGTTTTTAACAACGAAGATAACAGGTCTCCTGTTAAATGTAATGATTCAGAAAAACATTCAAACTCCGAGTCAGAAAATATTCCACTGAGTAAGATAAAGGAACGCTCATTTAAGTATGGAAAGAAGGATAGTGTAGGCTTAGCTGATTTTAAAGAGGATTCCTCTACGACAAGCAAGGAAAGCAGCAGCGAAAGTGACGGCAAACCACCTTCAATTAGAAACAACAAAAAGAATTCTACGTCCAAAGCGCATAGCAAGGTAGCAAAATCCTCTGAAAAAGGAGATTGGGTAGATGAATCAGCGTATGAACTCGGCGAATGGTTTCCTGCGGCCGTAACAAGCAGACAATGTATCCAAGAAGAAAAATTATCTCCTTATGAATCCATGTTCACAAACGCAGGATGGATGTATATAGGGGATAACACAACCCCAACTTTTGAAGATCTTGTCAAGCTTATCGCCAAGTGCGGTGGCCAGGTGACGAATACAACGAGAAAAGCTCGAATATGTATTGGTATAACGAGATGTCGCCAGTTTGAAAGTATCATGGTTCGTGAGAAGTGGGTTCTTGATAGCATATCAAATGGCAGCCTCCTGTCAACCGATCCTTATCTGATAGACAGTGCCGATGAAAGGAAAAGATCACCGAGCCCTGAATTTTAGCAAGACAATACATTAACCTGCATATATTTATAAATGTGATGGATCGCA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16589	BRCT_2	BRCT domain, a BRCA1 C-terminus domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036420	Homologous_superfamily	BRCT domain superfamily	Interproscan
IPR001357	Domain	BRCT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46954	C2H2-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19403	MCPH1; microcephalin	-	Chromosome and associated proteins	ko03036	deepkoala