Detailed information of scaffold596.g1.t1 in Morbakka virulenta

Genomic Location: scaffold596:1...50638
NR annotation: XP_033225891.1, tRNA-splicing ligase RtcB homolog [Belonocnema kinseyi]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9UXG6RNA-splicing ligase RtcB homolog OS=Monosiga brevicollis OX=81824 GN=24995 PE=3 SV=1
Q6NZS4RNA-splicing ligase RtcB homolog OS=Danio rerio OX=7955 GN=rtcb PE=2 SV=1
Q561P3RNA-splicing ligase RtcB homolog OS=Xenopus tropicalis OX=8364 GN=rtcb PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01139RtcBtRNA-splicing ligase RtcBFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001233FamilyRNA-splicing ligase, RtcBInterproscan
IPR036025Homologous_superfamilytRNA-splicing ligase RtcB-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11118UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000971Biological Processobsolete tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphateInterproscan
GO:0003972Molecular FunctionRNA ligase (ATP) activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008452Molecular FunctionRNA ligase activityInterproscan
GO:0072669Cellular ComponenttRNA-splicing ligase complexInterproscan

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