Gene detail

Detailed information of scaffold6.g136.t1 in Morbakka virulenta

Genomic Location: scaffold6:5684857...5700488
NR annotation: MCP4494014.1, reverse transcriptase family protein [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P16453	Histidine decarboxylase OS=Rattus norvegicus OX=10116 GN=Hdc PE=2 SV=2
Q5EA83	Histidine decarboxylase OS=Bos taurus OX=9913 GN=HDC PE=2 SV=1
P19113	Histidine decarboxylase OS=Homo sapiens OX=9606 GN=HDC PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00282	Pyridoxal_deC	Pyridoxal-dependent decarboxylase conserved domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010977	Family	Aromatic-L-amino-acid decarboxylase	Interproscan
IPR002129	Family	Pyridoxal phosphate-dependent decarboxylase	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006520	Biological Process	amino acid metabolic process	Interproscan
GO:0016831	Molecular Function	carboxy-lyase activity	Interproscan
GO:0016830	Molecular Function	carbon-carbon lyase activity	Interproscan
GO:0019752	Biological Process	carboxylic acid metabolic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan