Genomic Location: scaffold6:2754640...2766883
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita · all data for this species · gene families
| CDS |
| scaffold6.g167.t3 |
| Transcript |
| scaffold6.g167.t3 |
| Protein |
| scaffold6.g167.t3 |
scaffold6.g167.t3. This gene does have a gene model — the search simply returned no hit.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR028745 all species → | Family | A-kinase anchor protein 9/Pericentrin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44981 all species → | PERICENTRIN-LIKE PROTEIN, ISOFORM F | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0007165 all species → | Biological Process | signal transduction | Interproscan |
| GO:0060090 all species → | Molecular Function | molecular adaptor activity | Interproscan |
scaffold6.g167.t3.Transcript abundance of scaffold6.g167.t3 across 22 RNA-seq samples of Aurelia aurita. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| complete polyp | 3 | 0 | 0.00 | 0.00 | |
| polyp not induced | 2 | 0 | 0.00 | 0.00 | |
| polyp endoderm from body column | 1 | 0 | 0.00 | 0.00 | |
| jellyfish bell edge | 1 | 0 | 0.00 | 0.00 | |
| strobila non-segmented part | 1 | 0 | 0.00 | 0.00 | |
| polyp 12h induction with 5M2MI +20C | 1 | 0 | 0.00 | 0.00 | |
| polyp 24h induction with 5M2MI | 1 | 0 | 0.00 | 0.00 | |
| strobila segments | 1 | 0 | 0.00 | 0.00 | |
| strobila heads | 1 | 0 | 0.00 | 0.00 | |
| polyp 24h induction with 5M2MI +20C | 1 | 0 | 0.00 | 0.00 | |
| jellyfish ropalia | 1 | 0 | 0.00 | 0.00 | |
| polyp head region | 1 | 0 | 0.00 | 0.00 | |
| polyp 20h induction with 5M2MI +20C | 1 | 0 | 0.00 | 0.00 | |
| complete strobila | 1 | 0 | 0.00 | 0.00 | |
| 13 jellyfish ropalia | 1 | 0 | 0.00 | 0.00 | |
| complete juvenile jellyfish | 1 | 0 | 0.00 | 0.00 | |
| polyp ectoderm from body column | 1 | 0 | 0.00 | 0.00 | |
| jellyfish bell edge without ropalia | 1 | 0 | 0.00 | 0.00 | |
| 3 juvenile jellyfish (~7mm in diameter) | 1 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (AAURI1_TPM,
StringTie quantification over 22 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
