Gene detail

Detailed information of scaffold6.g176.t1 in Morbakka virulenta

Genomic Location: scaffold6:7080497...7082880
NR annotation: CAB4006561.1, CG8146 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold6.g176.t1

TTCGTTGCTTGTACTTCGAAGGGTAAACCTGCAAACTGCAGGTTTTGTCTTACAACCATGAAACTTTtgaaaaagcttctgaaacaactgaaaagaaaaaCAATGAAGCCGCAATGCAATGAAAAGTTGGAGGATGAAAAAGTTCACACAAAGTATGTGGAAGATGACTATATTCTCTCAACTTTACCTTGGTTTTGGCCTGAACTGCAAGGGGGAGATGCAGAAGAATTACTAAAAGACAAACCAAATGGGACGTTTTTAGTACGCAGAAGTTCTACGTCGGGGTTTGTGTTTACAGTAACGTACAAAATGGGAGGAAAAGTAGGTAGTATACGCGTACATTGTAAAGAAGGTATTTTTAGTTTAAGTTTTGCTGATCCTCTTCAACCCAGAGGAAGAACATTACAAGAGCTTATTAACAACTGGATTGCGGCAGCAAGAACTGGTTATTCTTGCAGCCTTCAGCGAAAACAGGATGGTGTTTTGTGTAGAATACCTTTTTCACTTCAGCAGCCCTTTCAGCGATCTATCACATTACAAGAATATTGCAGGAAAGTAATAATGCGGGCTTTACCATCTTCCACGGGTGTTGCTAACTTGGATGTTCCAAGAAGTATTGCTTGGTTTCTATTAAGCGTGTGATAAACGCATTAAGATGCTTTGGTGGAGTAGAAAAAAACAAAAAACACGCGGTGGTAATTAGGACGAGGACAAAGCAAAAGTACGTGCAGGAGGCACGTGGATGACCTGGCCATGCATGGGCATGTCTTTCTTCTGTAGCTGCGTGGGACATTGGAAATATCTCGTATTAAAAAATGACATGCAGTGCCAAGTTGTATGTTCTTGCCGGAAATGACATTCAACATAAAATATCATGTGAGGTCAATGTTTTTTTAAGGGAATTCAAATCGGATCCAACAATCCTGCATGAACATGCCAGGGTAAGAAGTTTTGTCATCGTTAGTTATCAGCAGAAAACTTAAATGTTACTGTTGTTTTGGGGGCTGGCTTTTTTTTCAAAAAGTGCATGTTTGAAAAGCGTATTTATTTAAAGACCAGGTGCAAAATGTTTAAAAAGCTATGTATATATAATTGTAGAACCCTTATAAGAAAAATATGTTGAATTACTCTGTTCAACAAACATAAACATTGTCCCTAAAATTAGGCGTTACACTGAAAGCGTACACAAGTTTGAAAATCGTGCAAGAGAAATCGTTTTATTTACTTTTAATGGTTAGTGGAACCTTCAGAAGTGGCAGTGCATGTAATGTTATAGAATGATGGCAAAGTAATATTCTATTCGTAAATATTTATTGTTATTATTGCTGCCACAGAGGACAGTTTTTAAGGGGGGTAGCAGACAAGACTTTAATAGTGTTACCAATTATCAGGATTGTAAGATTTTTTCAATATACAAGAAAAGACATTTTCTTTCCTTCGTTACTCTTTGAACAGCCAAAGAATTGTTTCATGGCTGTAAGGAGAGAGGTGTTTATCGTCCTGCAAATGATTCATCCCAGTTATTTTCTGCCAGCCATTTATAACAAACCTGCCCTCTGCAAAACGTCTTCCCTTTTAATTTGTTCATATTAGCTTATCAAATAGCATAAATCGGATGAGAAAAATATGCGGAGAAGGGAAAGATTTCGCTAGTCGTAAAACCAACTCTCTGGAAATAGTTTCGTTTATTTTCTTCGAGAAGGGTTAGGTAGAGCAAGAGGGGTTGGGTCTGTGCAATGTGTTTTTTGGGGGGGTTCATTTGCCTTTTTTTCAGTTTAAATCCCATGGCTTTTTGAAAACCTTTCCCCAAACCTGTTCAATAGATTCAATAGATGTTGATATTTTGGAAAAGCTGTCTGTTCCCACAACCACGATCAGTTAACTGAAAAGTTTGGTCTATTCTTGTCATGTCACAAAAAAGCATTGCTAGTTTTGGTGAACTATGATTAATCCAAGTTCCTCTCGTTAATACCAACCGATAAAAATTACACTACTTTGACTGAGGAATACACATTTGCTCAATGAGTGTCAATATTACTATATTTCATACATTCACAAGATTTTCTGTAAAAGTTTTGCAAATTTTGCACCTAATTGCTCCTAAGGGTGGAGAATTCGGTTGAGAATCAAGCATTTTTTTGTTCAACAGTTTATCTTTATCTTTCCAAGTTTTAAATTATCCTACAGATTTCTTCCTTTCGTAACTATCAATAATAAAAATTTACATTTTATCTATATGGTAAACAGCAGCATGTAGTTTTGAAAGACCCGACTCAGGAATACTGGAATACCAAGACAGCTATGAAACCTCGGCGCGTAAATTTCATATCTTATTTTCAGTTTAATCAAGTTAGCATTTTGCCCAATACATAGAAAGTAACTTC

Protein

Uniprot

Uniprot term	Description
O35717	Suppressor of cytokine signaling 2 OS=Mus musculus OX=10090 GN=Socs2 PE=1 SV=1
O88582	Suppressor of cytokine signaling 2 OS=Rattus norvegicus OX=10116 GN=Socs2 PE=2 SV=1
Q861R0	Suppressor of cytokine signaling 2 OS=Bos taurus OX=9913 GN=SOCS2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000980	Domain	SH2 domain	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR001496	Domain	SOCS box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10155	PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005942	Cellular Component	phosphatidylinositol 3-kinase complex	Interproscan
GO:0046854	Biological Process	phosphatidylinositol phosphate biosynthetic process	Interproscan
GO:0046935	Molecular Function	1-phosphatidylinositol-3-kinase regulator activity	Interproscan