Detailed information of scaffold6.g18.t2 in Morbakka virulenta

Genomic Location: scaffold6:736557...829324
NR annotation: XP_020612968.1, pre-mRNA-splicing factor CWC22 homolog [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q52KN9Pre-mRNA-splicing factor CWC22 homolog OS=Xenopus laevis OX=8355 GN=cwc22 PE=2 SV=1
Q08C72Pre-mRNA-splicing factor CWC22 homolog OS=Danio rerio OX=7955 GN=cwc22 PE=2 SV=1
Q5ZKA3Pre-mRNA-splicing factor CWC22 homolog OS=Gallus gallus OX=9031 GN=CWC22 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02854MIF4GMIF4G domainRepeatInterproscan
PF02847MA3MA3 domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003890DomainMIF4G-like, type 3Interproscan
IPR003891DomainInitiation factor eIF-4 gamma, MA3Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR050781FamilyPre-mRNA-splicing factor CWC22Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18034CELL CYCLE CONTROL PROTEIN CWF22-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13100CWC22; pre-mRNA-splicing factor CWC22-Spliceosomeko03041deepkoala

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