Gene detail

Detailed information of scaffold6.g23.t2 in Aurelia aurita

Genomic Location: scaffold6:336944...354175
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI1 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold6.g23.t2

cacgcttatctcttttaaatcgcaaactcattcactcgagaataatcaaaattactgctaagtttcaatgaagcagtgaatatttctgtaaatataattacgaaaaggaaagcgtcgattgaagattaaaatagatagctttaatatcataaactgcctcacattgcttgaatgcatttgcgtctgtatttacttgtaaagttgctgagacaagaaatttgctagagaattgatttgtgcaatgagagaagacgggagctagacttgcagtttatcttccagtgtatgtcagatctgttgactacgaatagctacatattgacttcaggaaatcgtgactgctgttttcataaatcgtgaaagacgttctagagctacacgacttctccaaagattgaagtttggctgttcttgaaagaaaaacaaaaagacttgcagtgttcgtccatgtcagatcctgctagtgcagtaaactgcacacttttgcttgattcgggaaatcgtgctgatattttcatacagacgttctagagctacacgacttctccaaagattgaagtttggctgttcttgaaagaaggaaaacaaaaacgtgcagcttatgttcgactatctaccagaccctgcgatattggattttggaaacattggctgttgtttgcatgaatagaattgttgtatacagtgtttcctacgacttctctaaggttggaagtttgaacgccttgaacgaaggaagatcaaacttattgcagttttgttgccgagtttctactagatccatgctagtgcaagaaatcgtttaaaccttggctgatttgtccatatatcgtcgtacatgttctacctgaaaattggtcttttcttgaaaggacggagctggaaattattgctgtctaatacactacacattgaatactggaattcgtttctcagctgatattttcataaattgatatgtaaattttcaaagattggaaatgcttctccaaagatcgatgttttcagtggggataaagtttcagtaattaattgcgtagcgagagacatgaatggtttgaatgtgaaccaagttggtgaaaagacattagaaacaatgaacggaattcattcacagttgaaagtttctcagaagaaattaaagaatcatgttctggaggatttcgatatttctacagttataggttggaagtttgaacgccttgaaggaaggaagatcaaacttattgcagttttgttgccgagtttctactagatccatcatgctagtgcaagaaatcgtttaaaccttggctgatttttccatatatcgtcgtacatgttctacctgaaaattggtcttttcttgaaaggacggagctggaaattattgctgtctaataaactacacattgaatactggaattcgtttctcagctgatattttcataaattgatatgtaaattttcatagattggaaatgcttctccaaagatcgatgttttcagtcgggataaagtttctgtaattaattgcgtagcgagagacatgaatggtttgaatgcgaaccaagttggtgaaaagacattagaaacaatgaacggaattcattcacagttgaaagtttctcagaagaaattaaagaatcatgttctggaggatttcgatatttctacagttataggatctggaacgttcgccagagtattccttgcacaagatgtaaaagatggtgaatattatgcattgaaagtgatgaaaatcaaaaatatgatcaaattgaatcaagtacaacacgtgaataatgaaagaagaatcatgatggaatgtgattgcccttttatagctaaatgcttttggtcattccatacacatgcttgcatcttcatgttattcgaattccttcccggtggagaactatttacatttcttcgaaacaaagtgaaattcaaatcttcggaagccaaattttatgcagcagaagtaattttagcattagaatatttacatggaagagacattgtttatagagatttaaaacctgagaatatcttactggacgaaaaaggacatgtgaaattgactgattttggattcgcaaaagagcttcaagacatgacgtggactctttgtggcactccagaatacatcgcaccagaagttattcaaaataaaggacatagtttttcagttgattgctgggcattaggaattttaatctttgaaatgcttgttggcactccacccttcacagatgatagccaatttgggacatacgaaagaatactcggaggccatataacatggcctaaatgtctagaagaaacatcagaattagatttgatatcaagactcctagactcagaccgaacagcgaggcttggtggatcaaggagaggtgtcgaagaaataaaagctcatcgctggtttgatgatataaattggtcagatgtttacaacaagaagttaaaaccgcccatacaaccaaagatcgcccacgctggggactcaagcaattttgatgactacagtgacgatgaatgggcggacgatgccccagaagcctctgcgaaagacattggtatgtttgaaagcttctgatagcagtcgatgaacgaacagtcatgtgacttccaaggaggagaaaccgtcacgttctcacggcaaggaggctcccgatcgagagaagctagaggagcagcagctatttgcgggcgagttgggggtgactgtttgtacaatactttccagagaaagcgtcgtacttctttgaaagaggtcttgatattccctaagagctatgaactcctaccccctcgcaccattaccagaaaagagagaccgctgccaggtcggttatgagaaatatatatataggctacgagatgagtctgatttttttgtacgaaaagagtaaataaaaggtcactgagcttagtactgactggtactgattaaagagaaaggaaaaatttgccagtttcgttctatctagctctatttgtggtaagtgggacttcagtttttttgtaaacagtatgaaaaaataggaacttctgaaacagttgaaattgtaaagatgtaagataataagttggaggtgaaaag

Transcript

scaffold6.g23.t2

CACGCTTATCTCTTTTAAATCGCAAACTCATTCACTCGAGAATAATCAAAATTACTGCTAAGTTTCAATGAAGCAGTGAATATTTCTGTAAATATAATTACGAAAAGGAAAGCGTCGATTGAAGATTAAAATAGATAGCTTTAATATCATAAACTGCCTCACATTGCTTGAATGCATTTGCGTCTGTATTTACTTGTAAAGTTGCTGAGACAAGAAATTTGCTAGAGAATTGATTTGTGCAATGAGAGAAGACGGGAGCTAGACTTGCAGTTTATCTTCCAGTGTATGTCAGATCTGTTGACTACGAATAGCTACATATTGACTTCAGGAAATCGTGACTGCTGTTTTCATAAATCGTGAAAGACGTTCTAGAGCTACACGACTTCTCCAAAGATTGAAGTTTGGCTGTTCTTGAAAGAAAAACAAAAAGACTTGCAGTGTTCGTCCATGTCAGATCCTGCTAGTGCAGTAAACTGCACACTTTTGCTTGATTCGGGAAATCGTGCTGATATTTTCATACAGACGTTCTAGAGCTACACGACTTCTCCAAAGATTGAAGTTTGGCTGTTCTTGAAAGAAGGAAAACAAAAACGTGCAGCTTATGTTCGACTATCTACCAGACCCTGCGATATTGGATTTTGGAAACATTGGCTGTTGTTTGCATGAATAGAATTGTTGTATACAGTGTTTCCTACGACTTCTCTAAGGTTGGAAGTTTGAACGCCTTGAACGAAGGAAGATCAAACTTATTGCAGTTTTGTTGCCGAGTTTCTACTAGATCCATGCTAGTGCAAGAAATCGTTTAAACCTTGGCTGATTTGTCCATATATCGTCGTACATGTTCTACCTGAAAATTGGTCTTTTCTTGAAAGGACGGAGCTGGAAATTATTGCTGTCTAATACACTACACATTGAATACTGGAATTCGTTTCTCAGCTGATATTTTCATAAATTGATATGTAAATTTTCAAAGATTGGAAATGCTTCTCCAAAGATCGATGTTTTCAGTGGGGATAAAGTTTCAGTAATTAATTGCGTAGCGAGAGACATGAATGGTTTGAATGTGAACCAAGTTGGTGAAAAGACATTAGAAACAATGAACGGAATTCATTCACAGTTGAAAGTTTCTCAGAAGAAATTAAAGAATCATGTTCTGGAGGATTTCGATATTTCTACAGTTATAGGTTGGAAGTTTGAACGCCTTGAAGGAAGGAAGATCAAACTTATTGCAGTTTTGTTGCCGAGTTTCTACTAGATCCATCATGCTAGTGCAAGAAATCGTTTAAACCTTGGCTGATTTTTCCATATATCGTCGTACATGTTCTACCTGAAAATTGGTCTTTTCTTGAAAGGACGGAGCTGGAAATTATTGCTGTCTAATAAACTACACATTGAATACTGGAATTCGTTTCTCAGCTGATATTTTCATAAATTGATATGTAAATTTTCATAGATTGGAAATGCTTCTCCAAAGATCGATGTTTTCAGTCGGGATAAAGTTTCTGTAATTAATTGCGTAGCGAGAGACATGAATGGTTTGAATGCGAACCAAGTTGGTGAAAAGACATTAGAAACAATGAACGGAATTCATTCACAGTTGAAAGTTTCTCAGAAGAAATTAAAGAATCATGTTCTGGAGGATTTCGATATTTCTACAGTTATAGGATCTGGAACGTTCGCCAGAGTATTCCTTGCACAAGATGTAAAAGATGGTGAATATTATGCATTGAAAGTGATGAAAATCAAAAATATGATCAAATTGAATCAAGTACAACACGTGAATAATGAAAGAAGAATCATGATGGAATGTGATTGCCCTTTTATAGCTAAATGCTTTTGGTCATTCCATACACATGCTTGCATCTTCATGTTATTCGAATTCCTTCCCGGTGGAGAACTATTTACATTTCTTCGAAACAAAGTGAAATTCAAATCTTCGGAAGCCAAATTTTATGCAGCAGAAGTAATTTTAGCATTAGAATATTTACATGGAAGAGACATTGTTTATAGAGATTTAAAACCTGAGAATATCTTACTGGACGAAAAAGGACATGTGAAATTGACTGATTTTGGATTCGCAAAAGAGCTTCAAGACATGACGTGGACTCTTTGTGGCACTCCAGAATACATCGCACCAGAAGTTATTCAAAATAAAGGACATAGTTTTTCAGTTGATTGCTGGGCATTAGGAATTTTAATCTTTGAAATGCTTGTTGGCACTCCACCCTTCACAGATGATAGCCAATTTGGGACATACGAAAGAATACTCGGAGGCCATATAACATGGCCTAAATGTCTAGAAGAAACATCAGAATTAGATTTGATATCAAGACTCCTAGACTCAGACCGAACAGCGAGGCTTGGTGGATCAAGGAGAGGTGTCGAAGAAATAAAAGCTCATCGCTGGTTTGATGATATAAATTGGTCAGATGTTTACAACAAGAAGTTAAAACCGCCCATACAACCAAAGATCGCCCACGCTGGGGACTCAAGCAATTTTGATGACTACAGTGACGATGAATGGGCGGACGATGCCCCAGAAGCCTCTGCGAAAGACATTGGTATGTTTGAAAGCTTCTGATAGCAGTCGATGAACGAACAGTCATGTGACTTCCAAGGAGGAGAAACCGTCACGTTCTCACGGCAAGGAGGCTCCCGATCGAGAGAAGCTAGAGGAGCAGCAGCTATTTGCGGGCGAGTTGGGGGTGACTGTTTGTACAATACTTTCCAGAGAAAGCGTCGTACTTCTTTGAAAGAGGTCTTGATATTCCCTAAGAGCTATGAACTCCTACCCCCTCGCACCATTACCAGAAAAGAGAGACCGCTGCCAGGTCGGTTATGAGAAATATATATATAGGCTACGAGATGAGTCTGATTTTTTTGTACGAAAAGAGTAAATAAAAGGTCACTGAGCTTAGTACTGACTGGTACTGATTAAAGAGAAAGGAAAAATTTGCCAGTTTCGTTCTATCTAGCTCTATTTGTGGTAAGTGGGACTTCAGTTTTTTTGTAAACAGTATGAAAAAATAGGAACTTCTGAAACAGTTGAAATTGTAAAGATGTAAGATAATAAGTTGGAGGTGAAAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR000961 all species →	Domain	AGC-kinase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24353 all species →	CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004691 all species →	Molecular Function	cAMP-dependent protein kinase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0005952 all species →	Cellular Component	cAMP-dependent protein kinase complex	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19584	PRKX; protein kinase X	EC:2.7.11.11	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.