Gene detail

Detailed information of scaffold60.g6.t2 in Morbakka virulenta

Genomic Location: scaffold60:286546...326125
NR annotation: XP_031574958.1, agrin-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold60.g6.t2

TGACGATGATGTTTAACAAAAACAGAGTAAAACTAGTTCGTAACTGGGAGCTCAGTCTTTTGAACTCTCTTCGTTTATTGGTACTTCAAGCATTGTTATGTCAAGCTGGTGCTCAGTCTTCCTGCGACGGAGTTAAATGTGGATTTTACAGTTCATGCCAGATtagaaatggattaccaacatgtgaatgcccagagtttgcactgagatatatgcacctgtttgtggaagtgatggaagaacatattctaatcTCTGTAAGCTCCAATCCAGCGCCTGTCGATTAATGAGACAAATAACTGTTATTAAGAATACATCATGTGCCAACGATATCCTGCCATGCAATGGAACAACATGTACCCTATACAGTCAGTGTGAGTAtaagagtgggttggccacatgtgtttgccctataggctgcaccaaagaatacacacctgtttgtggaagtgatggcaagacatatagtaaccctTGTATGCTGATGGTAAAAAGCTGCGAATTGAAGAAGTTAATTACTATAATGAGTAGAGGCGACTGTAGTGCTCAGTCTTCCTGCGACGGAGTTAAATGTGGATTTTACAGTTCATGCCAGATtagaaatggattaccaacatgtgaatgcccagacgtttgcattgagatatatgcacctgtttgtggaagtgatggaagaacatattctaatcTCTGTAAGCTCCAATCCAGCGCCTGTCGATTAATGAGACAAATAACTGTTATTATGAATACAACATGTGCCAACGATATCCTGCCATGCAATGGAACAACATGTACCCTATACAGTCAGTCCAACGATATCCTGCCATGCAATGGAACAACATGTACCTTATACAGTCAGTGTGAGTAtaagagtgggttggccacatgtgtttgccctataggctgcaccaaagaatacacacctgtttgtggaagtgatggcaagacatatagtaaccctTGTATGCTGATGGTAAAAAGCTGCATATTGAAGAAGTTAATTACTATAATGAGTAGAGGCGACTGTAAAGAAAACATCTCTAAATTTAGAGAACTGGTGTTGATAAGTGTAATTCCAGCAGTGTTTGTAGTTATCTTCATCGTCGTTGTTATTCTCTGGAAGTATAAAAGGAGAAGTAATCAAATGGAATCCTTCAAGAAAGAATTAAGATTGTGATCCTTAAGTTGGATTTTTTAGGGATGGCCTGCAGTTGGACATCTTTAAGTACTTGCAATGGTATTTGCAGTTTTATGTGTTTTCGTTTAGAATCAAAGATAGAATTAAAACACtttgtttacaaacgtcttctggataggatcattcagctttgcagcaaaacactcttgcacaaaaatggctttcgtttacaagagaagtttctgtagaattgatgaatctggcaaaggagttagctgaattcagttattaaactgatatgtatcatcacgtttactatgtaacatggactcgtcactgtgtcctcccttaaaaggtgtgaaacctattatgaaaaaagattatttgaatccaaaaacgtagatcattgtatgtattacagatttgcttttttgcaacttctaattacatttagtacattcaaaaagcaacaagataagattaacttcatgattaaccttaacaatctttattcgtctcaatgttcccactaaaacggacaggatagacgtttacagctttaggatgttttagcggaaatataattcccacttcttttaaaattagtgtgttttgaaagatagtgcatattgagctgtataaaaatgagacccattcaacttcatgcagtttaatattgtcctcgtcaaaagtttgctttgtcatactatccttaattgcaccagtgatacatttccaaacaaaagagatcgaaataagtaaattcatttcaataagagttaccattcattgtacaaaattactcattacaaattactaacttttatatatctagtcgcacagccctcacataaaaaaaggcctgtaagattagagctaccctgggttggtctTCCGAAAGTGTTTAAAAGTTATTCGTTCCTCTCATTGTGATCCTGGCTGATAAAATACCAATTGACATCTTTTTCTCATTGACTTGTTTAAATCATGGCCAATTAAGTTTTTGACCAAAATTAATTGAATCAAAATACAATAGGAAAAGAACCTTGTATTGTATCAAAAGTATAAAAAGAGTACCTAATAACTGTTCAGGCTGGAATGGTCACTTTTTGGTAGTTCTCAAAACATTTATAATCTAAGGGCATTGGTTTGCGTAATAACTTCACTGTGATACCCTAATTTTAGTGAAACTGGAGCAAAACAACACAATGTAACCTACTGTAATTCATTTTATATTGTAAatataatcagatacgagta

Protein

Uniprot

Uniprot term	Description
P31696	Agrin OS=Gallus gallus OX=9031 GN=AGRN PE=1 SV=3
A2ASQ1	Agrin OS=Mus musculus OX=10090 GN=Agrn PE=1 SV=1
P25304	Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07648	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002350	Domain	Kazal domain	Interproscan
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR050653	Family	Protease Inhibitors and Growth Factor Antagonists	Interproscan
IPR003645	Domain	Follistatin-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10913	FOLLISTATIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05152	TNFRSF14, HVEM, CD270; tumor necrosis factor receptor superfamily member 14	-	CD molecules	ko04090	deepkoala