Gene detail

Detailed information of scaffold606.g9.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold606:93616...96154
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21672 all species →	COMM_HN	COMMD protein HN domain	Domain	Interproscan
PF07258 all species →	COMM_domain	COMM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017920 all species →	Domain	COMM domain	Interproscan
IPR047155 all species →	Family	COMM domain-containing protein 4/6/7/8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16231 all species →	COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0032088 all species →	Biological Process	negative regulation of NF-kappaB transcription factor activity	Interproscan
GO:0033209 all species →	Biological Process	tumor necrosis factor-mediated signaling pathway	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0051059 all species →	Molecular Function	NF-kappaB binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold606.g9.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.