Detailed information of scaffold624.g4.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold624:37896...99713
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01410
all species →		COLFIFibrillar collagen C-terminal domainFamilyInterproscan
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000885
all species →		DomainFibrillar collagen, C-terminalInterproscan
IPR050149
all species →		FamilyCollagen superfamilyInterproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023
all species →		COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005201
all species →		Molecular Functionextracellular matrix structural constituentInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0031012
all species →		Cellular Componentextracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19721COL5AS; collagen type V/XI/XXIV/XXVII, alpha-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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