Gene detail

Detailed information of scaffold629.g7.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold629:103818...114754
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076 all species →	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11176 all species →	BOULE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003730 all species →	Molecular Function	mRNA 3'-UTR binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008494 all species →	Molecular Function	translation activator activity	Interproscan
GO:0045948 all species →	Biological Process	positive regulation of translational initiation	Interproscan
GO:0070935 all species →	Biological Process	3'-UTR-mediated mRNA stabilization	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold629.g7.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.