Detailed information of scaffold69.g29.t1 in Morbakka virulenta

Genomic Location: scaffold69:1023689...1084935
NR annotation: XP_056014981.1, uncharacterized protein K02A2.6-like [Ostrea edulis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6ZVM7TOM1-like protein 2 OS=Homo sapiens OX=9606 GN=TOM1L2 PE=1 SV=1
Q5SRX1TOM1-like protein 2 OS=Mus musculus OX=10090 GN=Tom1l2 PE=1 SV=1
Q68FJ8TOM1-like protein 2 OS=Xenopus laevis OX=8355 GN=tom1l2 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|GAT
Ubiquitin FamilyUBD|Alpha-Helix|VHS

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF00790VHSVHS domainRepeatInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03127GATGAT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR002014DomainVHS domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR008942Homologous_superfamilyENTH/VHSInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR038425Homologous_superfamilyGAT domain superfamilyInterproscan
IPR004152DomainGAT domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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