Gene detail

Detailed information of scaffold69.g4.t1 in Morbakka virulenta

Genomic Location: scaffold69:124413...203175
NR annotation: PZO93396.1, hypothetical protein DI617_08800 [Streptococcus pyogenes]

Gene Structure

More details in Jbrowse

Sequence

CDS

scaffold69.g4.t1

atgccaaaccttgttaagccaactctttttgctagtgatttcaaaagccaccataccgaatggggatacagtagaaatggcaagaatggaaccactcttgttgaatgggcaagtcgtgctaatcatctcctggttaatgaccctaaacagcaaaaaacctttaggtccgggatatggaaaaccgaaactaaccctgatctctgctggtggaatgggccacttcctacaccccgtagacctgtactagaacacttcctcagctctacacaccgaccatcaatcatcaacacccacatgacaattgatacccaaacgccttcacgcccagctccaggatggaacttccgcaaggcagattggccattgtatgcagaactagttgatgctgctgtatccaacctaccaacaccagagagtgataacatcaatgaaacctatgaagcctttaccaaaaccatcctgacagttgcccatgaaaccatccctggaggaaagaggaaacaatacatcccatgctgggacagccactgtgaagatcttctatggtcaatcagctcttctactgatgactcagctagaactgcacacacaaatgaacttaaagaacaccagaataatttaaagcgtgatcgttggcttgaaaccatggaacagatagatatgactcactctagccgaaaggcatgggccgtcatgaagcgccttactgggaaagggaaaccacctcaacagtgtcctgtgagggccaacgccatttcaagtgtcctcgttgcaaatgggaaattccctggtgctgataaagagcttgaaaatacgATACAGCTTTTAACTAACTTAATCAGATTCTATTTCTTTCGTAATATTAGAGAAAAAAAGAAACCCCTACTTATCAAGCAGCAACTATCTGTGTCCCTTGTTGTCATCGACATTGTTATTCTTGGAGGATTTCAAGGAGTGAAAAACAAGGAAGCATGTAGAACAGTAACAACTATTTTGCACTATGGAGTACTGTCTTGTTTCTCTTGGCTTTTTGCTGATCAATACTACAATTTCAAGTCTGTTGTAAAAAATGAGCCAATTTGCAGTTTTATGAGACTATGTGTTCTATCTTGGGGCTTTGCAATACCTTTTATACTTATTCAAATTATCCTTGGCTTTGTATCAAGTGGAAGGCTTGGATCCAAAGTCTACGTTTGTTGGAATTCTGATTACATAATACTAACATTAGCTATCCCTTCGTTTTTGCTGATAATGTTCTCAGTATTGATGCTGGTAAGGACCATTAAAACACTACTTACACCTGGTGTACTTACATCTTTTTCAAATCAAAAGGAATTGCAGGGAATAAAATATACAGTCAAAACAAGTGCAATGATGATTTTACTTTCTACAACAATTTGGAGCTTCGGGTTTTTGCTATTTTGGTATCCTGACAATGTGAATTATCAGCTCGTTTTTGCCTTGGGTCATGGTCTTCAGGGACTGTTCAACTTCTTTTTCCATTGTGTTTTTGCACTTGAGCAAAACATGTATGTCACAACAAATAGAGGACAAGATGAAGGCCAGGTGAATGCCTATATAGAAGATGGCCAGCGTTCAACTAAAATGACTGATATGATACCAGAGCTTGAGGGAAATGCATCAGCCAGAAAGCCATTGAAAAAGATGAGCCGCATTCAGCTAAGAAAGGAACCAGAAATTCCAAGCATGGTGGAAGAGGAAAATATAAAAGCTGTTGAATCTGTTGTAATAAACAATTTTGAGGAAATTTCAGGTACAGAAGCGCATAGTGCTCCTGCAGTTACTGAACACCATCAACAAAAAACCAGTGAGAAGATTTTCCAAAAGAAGACAACTTCAAATGCAGAATGTCCTATATCACCAACTAACAGAAAGCCTATACTATCAGAAAAAAGCGAGGCCTCGTCATCTGGTATTTTTATCGAGACCATACAAACTCCAAAAGCTAAAAGAAAAGACGAGGAAACAGCACCAAGTTCCAACTTGCCACCAAAGCCCCAAGACAAAGACACTGGCCATGTGCCTAATTTGTCCAAAATACTTTTATATAGAAACGAAAATAGCTCTTCTAGCATAAATGATAACGGAAGCGGTCAAAAATCCCAAAGTGCTCGAAGACGTGAAAGTTTAAACTCTACTTCTTCCTATGCATCACCTTGTAGTAGAAGAACCTCTCGGATTTCTGGCACAGGTCCCTTTGGGATGAACGAGCTTGAGAGCCTATTCAACAATCCTGACTTGATGAAGCAAACACAAGAGAGAAGGTCAAGCAATATTAGCAATGTTACCGACAAAACAGTACATAGTGATTCAAAGGCCTTTGATAAAACAGTATCAATGGGGCAGTCTGATTGA

Transcript

scaffold69.g4.t1

ggtactactgttgtgaatgtatacaaacctccaccagctgaactcggtccagagacgatgccaaaccttgttaagccaactctttttgctagtgatttcaaaagccaccataccgaatggggatacagtagaaatggcaagaatggaaccactcttgttgaatgggcaagtcgtgctaatcatctcctggttaatgaccctaaacagcaaaaaacctttaggtccgggatatggaaaaccgaaactaaccctgatctctgctggtggaatgggccacttcctacaccccgtagacctgtactagaacacttcctcagctctacacaccgaccatcaatcatcaacacccacatgacaattgatacccaaacgccttcacgcccagctccaggatggaacttccgcaaggcagattggccattgtatgcagaactagttgatgctgctgtatccaacctaccaacaccagagagtgataacatcaatgaaacctatgaagcctttaccaaaaccatcctgacagttgcccatgaaaccatccctggaggaaagaggaaacaatacatcccatgctgggacagccactgtgaagatcttctatggtcaatcagctcttctactgatgactcagctagaactgcacacacaaatgaacttaaagaacaccagaataatttaaagcgtgatcgttggcttgaaaccatggaacagatagatatgactcactctagccgaaaggcatgggccgtcatgaagcgccttactgggaaagggaaaccacctcaacagtgtcctgtgagggccaacgccatttcaagtgtcctcgttgcaaatgggaaattccctggtgctgataaagagcttgaaaatacgATACAGCTTTTAACTAACTTAATCAGATTCTATTTCTTTCGTAATATTAGAGAAAAAAAGAAACCCCTACTTATCAAGCAGCAACTATCTGTGTCCCTTGTTGTCATCGACATTGTTATTCTTGGAGGATTTCAAGGAGTGAAAAACAAGGAAGCATGTAGAACAGTAACAACTATTTTGCACTATGGAGTACTGTCTTGTTTCTCTTGGCTTTTTGCTGATCAATACTACAATTTCAAGTCTGTTGTAAAAAATGAGCCAATTTGCAGTTTTATGAGACTATGTGTTCTATCTTGGGGCTTTGCAATACCTTTTATACTTATTCAAATTATCCTTGGCTTTGTATCAAGTGGAAGGCTTGGATCCAAAGTCTACGTTTGTTGGAATTCTGATTACATAATACTAACATTAGCTATCCCTTCGTTTTTGCTGATAATGTTCTCAGTATTGATGCTGGTAAGGACCATTAAAACACTACTTACACCTGGTGTACTTACATCTTTTTCAAATCAAAAGGAATTGCAGGGAATAAAATATACAGTCAAAACAAGTGCAATGATGATTTTACTTTCTACAACAATTTGGAGCTTCGGGTTTTTGCTATTTTGGTATCCTGACAATGTGAATTATCAGCTCGTTTTTGCCTTGGGTCATGGTCTTCAGGGACTGTTCAACTTCTTTTTCCATTGTGTTTTTGCACTTGAGCAAAACATGTATGTCACAACAAATAGAGGACAAGATGAAGGCCAGGTGAATGCCTATATAGAAGATGGCCAGCGTTCAACTAAAATGACTGATATGATACCAGAGCTTGAGGGAAATGCATCAGCCAGAAAGCCATTGAAAAAGATGAGCCGCATTCAGCTAAGAAAGGAACCAGAAATTCCAAGCATGGTGGAAGAGGAAAATATAAAAGCTGTTGAATCTGTTGTAATAAACAATTTTGAGGAAATTTCAGGTACAGAAGCGCATAGTGCTCCTGCAGTTACTGAACACCATCAACAAAAAACCAGTGAGAAGATTTTCCAAAAGAAGACAACTTCAAATGCAGAATGTCCTATATCACCAACTAACAGAAAGCCTATACTATCAGAAAAAAGCGAGGCCTCGTCATCTGGTATTTTTATCGAGACCATACAAACTCCAAAAGCTAAAAGAAAAGACGAGGAAACAGCACCAAGTTCCAACTTGCCACCAAAGCCCCAAGACAAAGACACTGGCCATGTGCCTAATTTGTCCAAAATACTTTTATATAGAAACGAAAATAGCTCTTCTAGCATAAATGATAACGGAAGCGGTCAAAAATCCCAAAGTGCTCGAAGACGTGAAAGTTTAAACTCTACTTCTTCCTATGCATCACCTTGTAGTAGAAGAACCTCTCGGATTTCTGGCACAGGTCCCTTTGGGATGAACGAGCTTGAGAGCCTATTCAACAATCCTGACTTGATGAAGCAAACACAAGAGAGAAGGTCAAGCAATATTAGCAATGTTACCGACAAAACAGTACATAGTGATTCAAAGGCCTTTGATAAAACAGTATCAATGGGGCAGTCTGATTGAAATTTACTTCCATCAAGGAAGAACGGAATTTGTTTTAACGGATGCACACTACCACTGACCAGGTTACAAGTGAAACAAACAGAATACTCATTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052560	Family	RNA-directed DNA polymerase, mobile element	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36688	ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan