Gene detail

Detailed information of scaffold7.g156.t1 in Morbakka virulenta

Genomic Location: scaffold7:6108050...6149136
NR annotation: XP_046852752.1, mitochondrial carnitine/acylcarnitine carrier protein-like [Xenia sp. Carnegie-2017]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold7.g156.t1

GCTGAAGTAGAATTTACTGTGGAATCTGAGTTTTTGAAATTCCGCAAGAAAGCTACGAAAAGGAAGAAGGAGATTCAGTTCAGTTTTGTTTTTTTTAAATAGGCATTGACACGAAGTATTGAAACAAATTTAGATGAAATCAACCTTGATTTTACTCTAATTTACACTTAAAGAGTCACTGGAGCATTGTCGTATGCTGTAACTAAAAGAAGGAAAAGCCATCCTGTTCCGAAAACCAGTATTTCGATTTTCATATATTTACGATATGGTTATTCAGATAAAGTGATTCAGATACAGAGAAGTCGTTTAGGAGGTTATCATACTTTTTGAAGGCTGTCCGGGTTGCTGTTCTAAAACACATAGCTTCAGTACAAAACAAAAAGCTGTAGGTCTATTTCAGACCTAAAGGAATAGAAAATGGAGGAAGGTTTGGAAGGAAGTGCTGTTTATGAAGACTGTAGAAAAAAGAGCACTGTTAAGGTGTCGCCGATCAAGAACTTTCTTGCTGGTGCTTGTGGCGGTATGTGTTTGGTTGCTGTTGGACATCCAATGGATACAGTTAAGATCAGTGCAGAGCAGTGAGGGAGTGATGAAGATGGACAGAGCATTTATATGGAAAAACTTACTGCAGAACATGTGCTACTACAAACACAGCCAAAAGTTGATTTGGGTGAGAAACCACTATTCGCTGGGCCATTAGACTGTGTAAAGAAAACTGTTAATAAAGAGGGATTTAGAGGACTCTATAAAGGTATGGGGACACCATTTGCTTTGTCAAGTTTCCTGACTGCTACAAGTTTCCTTGGTTATCGTATAGGTAAAGCAGTTCAAGGTGTACCCGAAGGTGCACAGATAAGGTTGCATCAGAGTTTCATTGCCGGCATGTTTTCTGGTACTTTAGGGACAATATTTAGTGTGCCAGGGGAAAGAATCAAATGCCTATTGCAGATTCAACATGCAAATTCTGGTAAAAAAGCTTTTGCGGGCCCAATTGATTGTGCTGTGAAACTCACGAAAGAATTTGGCTTTTCTAAGGGTTTATACAAAGGAACCTGTATCACCTTAATTAAAGTACCGACGTATCCGGAACAAAACACAGACGATGTCCCCGGTATTGGAATGTATTTCTTTGCATATGAATTTTGTTTGAATAAGCTTAAACCAGAAGAAACTAAACGTTCGGAATGTCCATCACACCTGATACTTTTTTCAGGAGGTACAGCTGGAGTTATGTCCTGGGCTTTGACCATTCCTGTTGACACTATTAAGTCAAGATATCAAACGGGAACAGATAACAGTGGGGTAAGAAGCCTGTTTAGAAAACTGGTTCGTGAGGAAGGAGTAAGAGCTTTATACAAGGGTACAACACCCGTCATCGCAAGAGCATTTCCGGCTTGTGCGGCGTCTTTCTTTGGATACGAAACAGCCATGAAGTTCTTTAATTTGATTGCACCTTCGGTATAAGTATTCCGCCTCCTGGTCAACCATTCGCCTGTGCCACAACCGTCTTTGCGTTATTAACTGAAGACTGAATTCACCCGAGCTTTTCAAACTGGAATATACTGTTCTGATTAATAGGCTTGAAACATTTTTTAAAACTGATATTATGCAAAAGGACCATtttatctagttagtgctattatagtttatttttcatttatttatttGAAAAGAGATATGTAGAATTTTTTGCTTCGAGTACTTGGTTTTTAAAGCCCCAATAATATGGAAAGAATAGTTCTATTTAGTATGCAATTGGTCAACAAAATAAATGCTCCTGAACTCTTCCGAAAAATCCAAGCCTTACCTTATTCGTCAACTAAAGGTAATATACATTCAAAAGAAGCTTAATTGGCCTAGAAATAATGTATTTTCGTTAATTTTAATCAATTGTGATTTTAAGTGTGTTTGAATGTACAGTTTTCTATCTCCCTCTTTTGCAACTCATCTTCGTACTTGTATTGATTGGTATGGAAAGCATATTTTTAAGTGACTTGTTACTTTTTTTCTTGCGTAAATAGTATCCAATCATAAAGAGTTTTATTGTTATGTAGTAACCAGAAAATGATTTGATATTATATAGTTGATAGCAGACACGAGTAGACACAAATAACTATATCGAATAACATGAATATCCAAAAGTAGTCAAAAGTCAGATCCATGATCACTACCATTCTACAGTATCCAATCATAAAGAGTTTTATTGTTATGTAGTAACCAGAAAATGATTTGATATTATATAGTTGATAGCAGACACGAGTAGACACAAATAACTATATCGAATAACATGAATATCCAAAAGTAGTCAAAAGTCAGATCCATGATCACTACCATTCTACAGGTAAAGGATTTTGGAGTCATTGCAATTTATTCTAAATGCTAGTGTGTTCAGATTTTTAAAATAAAAGTGGCCAGATTTTTTAAATAAAAGTGGTCAGATTTTTTGTGTTTAGTTCAATTTGATATTTTGGTCTACTAGTCGACTGTTAATCGATAGCCCGATTTATTGGAAAAGCGCCCTAAGACTGGCTGATTTCATAAGACGTCCTTTACTTTCACTGTCATTAAATAAACATTCTATAAAGTATGTTTGAGCTTTGTTAGACAAGTGCTATGAAAATTAATTAAACAGACACGAAGAAGTTTTGTATCCTCCAAAACGGTGTTTTGGTCCACGACGTACTTTTGTTATATGATGAAACGTTCTTACTTCATTTTCGAAAGCTACGTTTGGAGATATAATTCTCGCAAAACACATCTTAGTGTAAATTACCACGTTATGATGGCGGAATAGACCTCGCTGTATATTGAAAGTTTTGTGCTGAATCAAACTTACGTTTTTACTGCGTGACAACGAGAGAAGTATCTAGTGAAGGATAGCCAAAGGTATATTCAGTTTCATATTTTGATAAACAACACCATATCACACGGGTTGCACTGAAAAAAGAAGCTACTTGCTATTGGTGCACAATGTAATAGTCACAGGAACTGTGAGCATTGGGCTAGTTGTCAGTCCTCTTGTAGAGTAACCAAGGCAACTTGTTTTGATCCCCTTGATAATGTAAGCCTTGTAACCCCACAAACCACTATTTCATGCCATCGGGAAAAGGTATCTGGGTAATTTTCCTTCTATGCTATGTTAGTAAATTAGAGCTTCTGCACTCAGATTGTGTATGAAAATAACGACGTTGAAGGAAAAGAAGTTACAGAGATGTGACAGAATCGACTAACAAATTATATTTACTTGGCCATATTTTGGCTAACATTTTTTGGAAAGTGTTAGTCTTAATGGGTTTCATTGGCATACAGAGGTAAATAGGTTTTTTATCATACCACATCACTTTTGAAATGTAGTGAAATGCGAAAACTTTCTTCCTTTACTCGATTCCTTCTTAGAGGTTTTTAAATCGATAAGCCATGTTTTTTTAATATTTTTAGACAGAATTTAATAATTTGTTAGCAAGTCT

Protein

Uniprot

Uniprot term	Description
Q9Z2Z6	Mitochondrial carnitine/acylcarnitine carrier protein OS=Mus musculus OX=10090 GN=Slc25a20 PE=1 SV=1
O43772	Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens OX=9606 GN=SLC25A20 PE=1 SV=1
Q8HXY2	Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis OX=9541 GN=SLC25A20 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR050567	Family	Mitochondrial Carrier	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45624	MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005740	Cellular Component	mitochondrial envelope	Interproscan
GO:0006810	Biological Process	transport	Interproscan
GO:0006839	Biological Process	mitochondrial transport	Interproscan
GO:0015227	Molecular Function	acyl carnitine transmembrane transporter activity	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:1902603	Biological Process	carnitine transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15109	SLC25A20_29, CACT, CACL, CRC1; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29	-	Transporters	ko02000	deepkoala