Detailed information of scaffold7.g36.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold7:415650...447114
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
No Pfam domain signature was detected for scaffold7.g36.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039804
all species →		DomainListerin, zinc finger, RING-typeInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR011016
all species →		DomainZinc finger, RING-CH-typeInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR039795
all species →		FamilyE3 ubiquitin-protein ligase listerinInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12389
all species →		ZINC FINGER PROTEIN 294Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0043023
all species →		Molecular Functionribosomal large subunit bindingInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0072344
all species →		Biological Processrescue of stalled ribosomeInterproscan
GO:1990112
all species →		Cellular ComponentRQC complexInterproscan
GO:1990116
all species →		Biological Processribosome-associated ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22377LTN1; E3 ubiquitin-protein ligase listerinEC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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