Detailed information of scaffold7.g45.t2 in Morbakka virulenta

Genomic Location: scaffold7:1497249...1602388
NR annotation: XP_047488218.1, uncharacterized protein LOC125038695 [Penaeus chinensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9ULG1Chromatin-remodeling ATPase INO80 OS=Homo sapiens OX=9606 GN=INO80 PE=1 SV=2
Q6ZPV2Chromatin-remodeling ATPase INO80 OS=Mus musculus OX=10090 GN=Ino80 PE=1 SV=2
Q9VDY1Chromatin-remodeling ATPase INO80 OS=Drosophila melanogaster OX=7227 GN=Ino80 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF13892DBINODNA-binding domainDomainInterproscan
PF20049DUF6451Domain of unknown function (DUF6451)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR020838DomainDBINO domainInterproscan
IPR050520FamilyINO80/SWR1 chromatin remodeling helicaseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR045609DomainDomain of unknown function DUF6451Interproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45685HELICASE SRCAP-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0031011Cellular ComponentIno80 complexInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0043044Biological Processchromatin remodelingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11665INO80, INOC1; chromatin-remodeling ATPase INO80EC:5.6.2.-
Chromosome and associated proteinsko03036deepkoala

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