Gene detail

Detailed information of scaffold70.g25.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold70:314800...331574
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold70.g25.t2

aatgattgaattgaattcgaaaaagaagccatcgctatgctgtgaaaccctttggatgtgctctgctgttgattggaaggaatgaaatggcttctacaccacctgagacaattcgtgggcaaattttcgatgttggaccaagatatgtgtcgcttagctacattggagaaggtgcatatggaatggtgtgctctgcatctgatacatattctaaacagaaagttgcaataaagaagatcagcccatttgagcatcaaacatactgccagcgtactttgagagaaatcaagattttaacaagattcaaccatgagaatattataaatatccaagatattatgcgagcacaacaaatagctgatatgaaggatgtatatatcattcaaactttgatggaaacagatttgtacaaacttttgaaaacacagaaattaagcaacgatcatgtttgttattttctgtatcaaattctgcgtggtttgaaatatattcattctgccaatgttttgcatagagacctcaagccaagtaatctcctgttgaatacgacatgtgatctcaagatttgtgactttggattagcaagagtagctgatcctcagcatgatcatactggaatcctgacagaatacgttgcaacgagatggtatcgtgctccagagattatgctcaattcaaaaggctatacgaaatcaatagatatttggagcgttggttgtattttggctgaaatgttatcaaatatgccgttattccctggaaagcattatctggaccaacttaatcatattttaagtgttttgggatcaccttcccaagaagatttgcagtttatcagaaatgaaaaggcaaaatgttatttgcaaggattaccccaaaaacaaggcacaacttgggctaaactctttccacttgcagatcccagaggtcctatctcttaaaaagataaaagttttgcaaaacagctgataaaaccgtttaaataccggcacttggatgataaaatattttgtcatgtttatgctgaaaatgtgaagccaaatgtttcgattgaatatccagaaaatcagatctttttaggccataactgatttctaaaatgaaatatccgaatgcttagattaaagataaaatttactttcggcagagtttgggtgaaacctcaatttcagatgcaaaacattaagtgagcctttttggccttttacccagtttgcacccatttcatcctaccattcaactggaaatacagaaagcgtttttatgattttgttcacgaagacctctattcctttgcctcattgcctccatggctcatgtacttgtatccgcaatgtttttaggacctcgctaaaagtacgtattttgaggaataataatctctacatgcacacttgacgtcgttgccaggtgaacaaaaagagtttcggcgcttgcccatagcagtctgaaaattgaaggtgatttttctgtggaactgtttctgaaaagctcgacaaaaaacgaaaacatgattgaacaggttttcacagcctgactttccaacgtacttttctccacaactaaagcaattcgttatggtttgtaatcgtacgactgtaccgccagcagctcttttatattccaccttgtatgtttttatgaactgcacatcatctaacatttgcaagcccatcttaagaaatctttaggaacttgatatatgtagcactgtaaatcaaaatttatcaactattgtatgaagattttttctaggttaggctcctttctttattagagactgaatttcatggatctgtcattttgtgtttctcgaagatttagtgctttttgtttttgtttattttatatcctttttgatcttattgcattcgaatggtcagtagatgttatagagagaaaatgtggttattttttggtcagctctagccctgtgatactcctttgtatagcctgtatagcccagttgtcagcttttcgtattgacaggaaattttttaaggagagtgtggatgagttctgcatagccttgagtttgtggagaataacgaaaatgtgaaata

Transcript

scaffold70.g25.t2

aatgattgaattgaattcgaaAAAGAAGCCATCGCTATGCTGTGAAACCCTTTGGATGTGCTCTGCTGTTGATTGGAAGGAATGAAATGGCTTCTACACCACCTGAGACAATTCGTGGGCAAATTTTCGATGTTGGACCAAGATATGTGTCGCTTAGCTACATTGGAGAAGGTGCATATGGAATGGTGTGCTCTGCATCTGATACATATTCTAAACAGAAAGTTGCAATAAAGAAGATCAGCCCATTTGAGCATCAAACATACTGCCAGCGTACTTTGAGAGAAATCAAGATTTTAACAAGATTCAACCATGAGAATATTATAAATATCCAAGATATTATGCGAGCACAACAAATAGCTGATATGAAGGATGTATATATCATTCAAACTTTGATGGAAACAGATTTGTACAAACTTTTGAAAACACAGAAATTAAGCAACGATCATGTTTGTTATTTTCTGTATCAAATTCTGCGTGGTTTGAAATATATTCATTCTGCCAATGTTTTGCATAGAGACCTCAAGCCAAGTAATCTCCTGTTGAATACGACATGTGATCTCAAGATTTGTGACTTTGGATTAGCAAGAGTAGCTGATCCTCAGCATGATCATACTGGAATCCTGACAGAATACGTTGCAACGAGATGGTATCGTGCTCCAGAGATTATGCTCAATTCAAAAGGCTATACGAAATCAATAGATATTTGGAGCGTTGGTTGTATTTTGGCTGAAATGTTATCAAATATGCCGTTATTCCCTGGAAAGCATTATCTGGACCAACTTAATCATATTTTAAGTGTTTTGGGATCACCTTCCCAAGAAGATTTGCAGTTTATCAGAAATGAAAAGGCAAAATGTTATTTGCAAGGATTACCCCAAAAACAAGGCACAACTTGGGCTAAACTCTTTCCACTTGCAGATCCCAGAGGTCCTATCTCTTAAAAAGATAAaagttttgcaaaacagctgataaaaccgtttaaataccggcacttggatgataaaatattttgtcatgtttatgctgaaaatgtgaagccaaatgtttcgattgaatatccagaaaaTCAGATCTTTTTAGGCCATAACTGATTTCTAAAATGAAATATCCGAATGCTTAGATTAAAGATAAAATTTACTTTCGGCAGAGTTTGGGTGAAACCTCAATTTCAGATGCAAAACATTAAGTGAGCCTTTTTGGCCTTTTACCCAGTTTGCACCCATTTCATCCTACCATTCAACTGGAAATACAGAAAGCGTTTTTATGATTTTGTTCACGAAGACCTCTATTCCTTTGCCTCATTGCCTCCATGGCTCATGTACTTGTATCCGCAATGTTTTTAGGACCTCGCTAAAAGTACGTATTTTGAGGAATAATAATCTCTACATGCACACTTGACGTCGTTGCCAGGTGAACAAAAAGAGTTTCGGCGCTTGCCCATAGCAGTCTGAAAATTGAAGGTGATTTTTCTGTGGAACTGTTTCTGAAAAGCTCGACAAAAAACGAAAACATGATTGAACAGGTTTTCACAGCCTGACTTTCCAACGTACTTTTCTCCACAACTAAAGCAATTCGTTATGGTTTGTAATCGTACGACTGTACCGCCAGCAGCTCTTTTATATTCCACCTTGTATGTTTTTATGAACTGCACATCATCTAACATTTGCAAGCCCATCTTAAGAAATCTTTAGGAACTTGATATATGTAGCACTGTAAATCAAAATTTATCAACTATTGTATGAAGATTTTTTCTAGGTTAGGCTCCTTTCTTTATTAGAGACTGAATTTCATGGATCTGTCATTTTGTGTTTCTCGAAGATTTAGTGCTTTTTGTTTTTGTTTATTTTATATCCTTTTTGATCTTATTGCATTCGAATGGTCAGTAGATGTTATAGAGAGAAAATGTGGTTATTTTTTGGTCAGCTCTAGCCCTGTGATACTCCTTTGTATAGCCTGTATAGCCCAGTTGTCAGCTTTTCGTATTGACAGGAAATTTTTTAAGGAGAGTGTGGATGAGTTCTGCATAGCCTTGAGTTTGTGGAGAATAACGAAAATGTGAAATA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR050117 all species →	Family	Mitogen-activated protein kinase	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008349 all species →	Family	Mitogen-activated protein (MAP) kinase, ERK1/2	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR003527 all species →	Conserved_site	Mitogen-activated protein (MAP) kinase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24055 all species →	MITOGEN-ACTIVATED PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0004707 all species →	Molecular Function	MAP kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold70.g25.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.