Gene detail

Detailed information of scaffold729.g2.t1 in Morbakka virulenta

Genomic Location: scaffold729:42345...46145
NR annotation: QBL02612.1, leucine-rich repeats containing GPCR-like protein, partial [Tripedalia cystophora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold729.g2.t1

TAGGCCATCAAATGGTAACAGTTGGGTTATAGAAAAGAGGAATACAAGGGTGAAGGGTGGTACTATATACATACCCATTTGGGGTAGGTAGGCCATCAAATGGTAACTTTTGGATTTGAGAAAAAAGGAATGCAGTGGTGAAGGGTGGTACTATATACATACCCATTTGGGGTCAATGAACAACAATGAACTGGAGTATATTAATCCAATGGCTTTTTCAGCCCTCGAAATGATCCAGATCCTTTACTTGAGAAACAACCGACTGTCGTCATTTCCTACAGATGGCTTGCAAAGTTTGATGATCGTGGAAACTAAAGGAAATCCAAATCTTAAAGATTTTCCGACGTACAAGAAACTTCCGAATATACGAAAGCTTGTAGTCGACTACGCCTACCATTGTTGTTACTACCTAGAAAGGAAAATACAATTGGAAAAAGTCCACAAGGCTGTCGATTCGGAAAACGAAATGTCGGTTAGCTGGCAGTGGGAAGATAAATCCCTAGAAGATTCTGAAGATTCTTTCTCAGAACCACCTGCTGATACGCAACCCGAAACTCTTGACGAGAATAAATTAGAAGCATTGTTACAAAAACTAAATAAAGGGTTGAACGTGACCTTGGTGAAAGAAACATCACAGAATTACAGAATGTTTATTCCGCCGATAATAAATGAAGGGGAAAAACTTTTGTTAGACTCATTAACATGCATCCCGTCGCCAGATGCCTTCTATCCGTGTGAAGATTTAATGGGGAAAGAATGGCTTCGTGTCTGTGTATGGTTTGTTTTCGCTTTGGCTTTAATAGGTAACATTGCTGTAATAGTTGTTTTACTTGCAAGTCGTTATAAATTCGATGTGCAAAAACTTCTAATTCTAAATCTTGCATTCGCTGATTTACTCCTCGGGATTTATCTTGGATTTTTGGCCATTGTCGACATAACTACCCTTGGCAATTTCCGCGCACACGCCATTGAATGGCAATTTAGCAACAGATGTAAAAGTGCTGGATTTCTTGCTGTATTTGCAAGTGAATTATCAGTATTCACATTATTAGTCATTACAATAGAACGAGTTATCAAGATCGAGTATTCCATGTATCTCGATAAACAACTAACGATACTTAAAGCTTCGATAATCATGATCATCGGGTGGATATTTTCTTTGGTTGTTGCAGTCTTACCGCTTGTACGTATCAAGACAGATAGCGGAGACATTTACTTCAGCGATTACACCAAATACAGTGTTTGTTTACCATTTGATGTGCCAGAGGTAGGTTCACCAGCACGTATATATTCCGTTGCCTATTTGGGATTTATACTCGTTTTAAATTTGTTTGCGTTTGTTGTCATTACGTGTTGTTACATTCGAATATACAGAACGGTCAGTGGGTCTAATTCCTTCAACTCGAGCGATGCACGACTCGCCAGGCGAATGGCTTTGCTAATATTTACAGACTTGGCATGTTGGTTTCCTATTGCAGTCGTTGCTTTATCGGCAGTTTTCACGGAGCCTATGATCAAAGATTTATGGATTTCGAAGGTATTCATAGTCTTCGTTTTTCCCCTCAACGCTTGTGCCAATCCTTTTCTGTACAGCATTTTTACCAACCAATTCAAAGAAGACTTTTTTTCAATTTACCGGCAGATAAAAGGGGGGCATTCCAGCGTAGCAGATAGGATCCTGCAGGCTTTGAAGCCGAGTCAAAGTACGTATTCGGTATTTCGCCGAAATTCCTCGTTTTCCTTTCTATTAAATAGACGAGGATCGTCCAGGATCGAAGACCCTCGTAAAGCCTCGCGTACAAATCGCCCGCAGTCGAATTCAGACGAAGGAAACCAAGAAGAAATAAATACGTTAACTGTAGAAAGAGAGACCTGTTTGTAAATGGCTTAACTGTATTTGCTATTAAGCAAGAGAATTGATGACAAGATAACTTTTGATGTTTCAAGTACCGTTTTTATAGCGAAAAGCATCCATAGAGTTTGGGAACTTTTTGCTGGTTCAAATAATTTGAAGATCTGGACGTTTCAAAACATTGCTGCATTGAAAATGATTGAGCTTCCAGAAGGAAACAGTATACAAGTTAAAACTGAAGATTGAATTCAAATAAGCCTATTCTAATTAA

Protein

Uniprot

Uniprot term	Description
Q7ZTV5	Follicle-stimulating hormone receptor OS=Cairina moschata OX=8855 GN=FSHR PE=2 SV=1
Q6YNB6	Follicle-stimulating hormone receptor OS=Notamacropus eugenii OX=9315 GN=FSHR PE=2 SV=1
Q5GJ04	Follicle-stimulating hormone receptor OS=Felis catus OX=9685 GN=FSHR PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR002131	Family	Glycoprotein hormone receptor family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24372	GLYCOPROTEIN HORMONE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007190	Biological Process	activation of adenylate cyclase activity	Interproscan
GO:0008528	Molecular Function	G protein-coupled peptide receptor activity	Interproscan
GO:0009755	Biological Process	hormone-mediated signaling pathway	Interproscan
GO:0016500	Molecular Function	protein-hormone receptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04247	FSHR; follicle stimulating hormone receptor	-	G protein-coupled receptors	ko04030	deepkoala