Gene detail

Detailed information of scaffold73.g72.t1 in Morbakka virulenta

Genomic Location: scaffold73:2740276...2787195
NR annotation: CAH3107905.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold73.g72.t1

GTCTTAAATGTCTTCAAGTTATTGTACAAAAGAAGCCAGATAAGATATGGAGCCATTTGCAACAAATTGGATTTTTGCCAAGAATGGACCAAAACATGGTTGATAGTACACCGACAGGATCACAGAATGTTGTGATGGGCCACCTTGGAAATATAATTATGGGTATCGAATGCGTTAAAGGGACTTACTCAGTGATGAAAGAATACCTAACTTTCTTCCTAGAGTTTATTCAGGTCATTCATGATAACAAAGATGTTTATAACGAGTTCTTTAGTCATGCGTTCAGTGACTATATGGCCAATATTGTTCTTATTGCAAGAGATTTGCTTGGAGGATTTAGTCAATGGCGTTTTGTTGTACCTGGAGAGAAGGAGATCCTCGCTAAGGAACTGCTTCAGATTGCAAATATCATTCTTGCACAGAACCAAGCTACAGGAACAAAGTTCTCATTGAATGAATTCAAGGCGGACACTATCATTCTTAAAGCTTTTCTGTTCCATGAAGCCGGAGAGTTGTTGCTGAATATTACAAGCATGGGTGTTGACACAGTCATTCGAAGTACAACTGGGCCATCAAGAGGTCTTTCATCCGATGTGACACAGGTAGTAAAACTGGCGTTTTCCCTGCTTATAAAGCTCCTAACCAGAAGTACCAAGATGAAAGACCTTTCACCTCTTGAAGAAGCTCTCTGTGTTCAATATGTTTCCCAGAAAGGAAGCATGGAAAACTTACAGGGTAAAACCACTTTGATATCGGTGTTAGCCGATTATATTTATTATCAAGACGATGCAAAGCTGCCAACGCTAGCCGTTATGGTTTTGCAGAAACTCTGCTTGGTCTCCCCTATATCAATGGCAGCAGCATTAGAACCTGATGCAGCAGGGGTAAGAAATGCATTTGCGACACGGCTTCACCAAGGAATCGAACCAACGCGTCTTAAGGTGGCGATTTTAGAATTTGTTGCTGCAGCTGCAGAGCATCAGCCTGGCTTAATGGAACTCTTTGTTCAATTAGGACCTGCTAAGAAGAAGGATAAAAATTCCAAGGGTTTGACTTTTGGAAAGTTCAGTTGCCTTGGACCAATTCTTGACATCTTGGATCCAACAATAGAAAGTGATAAGCCTCTTGTACTACTTGCTGCTGCTCTAAAAACGTTGGAATCATTTTGGATGAACAGAAGAGATTCAGTTTTAGAAGTACTACGACATAGGGAGCATTTTTGGAATAACCTCCTTTATCACCTGAAGATGGTTTTTCAAGAGGAGATTGCCCTCGAAGAAGACCAATGTGTTGCATATGTGTTAAAGATTGTTGCCCTTGAGATGTACTATGCGAGACAGGATGATTTGGATCAGGAGTTAAAAGATGGTTTAAAGAAGTTTGTGACCAAAGGGTTCTACGAACAACTAACAAAGCGGCTACTATGTACAGATGGTGACTTACCAACTAAAGCTTGCTCATCTTTGCTTACATTCCTCCGTGGATTAGAAATGTTTCTCTTTACTGGATCACATCTGCATGCGGAGAAATGTAACCTGACAGTAGCCATTCGAGAAGGAATTTTAGCTGATATCTTAACAGGATTGAAGACTTGGGTTGCTTCAACTCATCACGGCTTGAAATATATTATCGCTAATGAGTTATCAGATATTGCAATGGTATTAGCAAAACGATGGGGGAAGTTGATAAGGAATGCTTCTTCCCATATGGTCCTTTTGGTTGAGATGTTAGAAGAAACGCTGGCATCAGAAAAGCAGCCAATTAAATTGCAGACCACACTTATTTGTACAACTTTACATCTTTTGCAAGGAAATGTTGACCAAAATGTCAAGGGCCAAAAGATAAAGAAAGAAGTTGTAGTCTCACTTTTATCTACTGTTTGCCGCACAATGAAATTTTATGACTGGTCAACTGAAGATGAAAAGAAACACGAAGACAATATGAAGCTCGGCATGTTATCAGTCTGCGTGTTGAATACGCTGGCCAATCTCGTTCCTTCGACTGGAAATCTAACGGAAATGATACGAGAACATTCCATACTCCCCGCTGTCTTCTTCGTTATCGAATATTGTTTGAAGAACGTGAAAGAACTGAAAATGGCCCTTGCTGGAATGTTACTTCTAAGATCATTTTCAAAATTCCCCAAGATTGCTACCGTTATGGTGTCCAATGGAATCACAAAGCTTCTTTGTCTTCACTTAACCCCTACGTATGTACTCGCTGAGGATCCGTGTCATGCCAATGATGCATCGGACTTATATGAAATCTGGTGTTCAGGTATTTCAATAGCATCAAACTTACTGAAGAACCTTAATCACGGTTTTCTGGCAAGTGCGCTAGACTTCGTCGGTGCCCACAAAGAACGCCTTCTGCAGGCAACCAAAATTATGAGACAAGTACATTCTAGTCAATTGCTCACAGAAACTGAAGAAGTATCAAAGTTTTTTTTTCATGTTACACGATACCCGAAAGACTGGCATTTCTCGCTACCGGCTGTCATGTCTTCTTTTCAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21093	Nup188_N-subdom_III	Nucleoporin Nup188, N-terminal subdomain III	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048883	Domain	Nucleoporin Nup188, N-terminal subdomain III	Interproscan
IPR044840	Family	Nucleoporin Nup188	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31431	NUCLEOPORIN NUP188 HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006405	Biological Process	RNA export from nucleus	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0017056	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:0044611	Cellular Component	nuclear pore inner ring	Interproscan