Detailed information of scaffold770.g5.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold770:63515...70974
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Transcription factor familybHLH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010
all species →
HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011598
all species →
DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638
all species →
Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050370
all species →
FamilyHairy and Enhancer of Split/HEY-relatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10985
all species →
BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046983
all species →
Molecular Functionprotein dimerization activityInterproscan
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009952
all species →
Biological Processanterior/posterior pattern specificationInterproscan
GO:0050767
all species →
Biological Processregulation of neurogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold770.g5.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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