Genomic Location: scaffold8:3181866...3313544
NR annotation: MCH9665805.1, hypothetical protein [Gammaproteobacteria bacterium]
| CDS | |||||
| scaffold8.g76.t2 | |||||
| Transcript |
| scaffold8.g76.t2 |
| Protein |
| scaffold8.g76.t2 |
| Uniprot term | Description |
|---|---|
| O02751 | Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2 |
| Q588U8 | Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1 |
| Q86TZ1 | Tetratricopeptide repeat protein 6 OS=Homo sapiens OX=9606 GN=TTC6 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13181 | TPR_8 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF14529 | Exo_endo_phos_2 | Endonuclease-reverse transcriptase | Domain | Interproscan |
| PF13414 | TPR_11 | TPR repeat | Repeat | Interproscan |
| PF00515 | TPR_1 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR050498 | Family | Photosystem I assembly protein Ycf3 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44858 | TETRATRICOPEPTIDE REPEAT PROTEIN 6 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K24929 | TTC6; tetratricopeptide repeat protein 6 | - | Domain-containing proteins not elsewhere classified | ko04990 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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