Detailed information of scaffold82.g32.t1 in Morbakka virulenta

Genomic Location: scaffold82:976690...1122912
NR annotation: MCP4485596.1, reverse transcriptase family protein [Flavobacteriaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NBX4Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
Q9P232Contactin-3 OS=Homo sapiens OX=9606 GN=CNTN3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013099DomainPotassium channel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP