Gene detail

Detailed information of scaffold82.g7.t2 in Aurelia aurita

Genomic Location: scaffold82:65185...79745
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold82.g7.t2

caaatgctaggtggcaggtatcctcagtgttcatttgactgcaggcagccggagggaagggacaaatactctgagatagaagcaaatgaaacacttataatttatgaaatataacgcaaagatgtttactagaatattatcatcaaggatacgatcctgttcaaactgtttatcaagacaaaatgtgttaccagttggtggattttcacgaagtatggtcgtggtgcctggaggcccgcaaaagaaaacagcacttgacttcagaaatcagttgaaaaatgcgaaaagaattgtcgtcaaacttggatcagcagttgtaacaagagatgatgaatgtggtgtagcattgggaagacttgctgccattgttgaacaggtttcagaacttcaaaatactggcaaacaaatgatggttgtcacaagtggtgctgttgcatatggtaaacaaaggctgagaggagaaatgtcaatgcaacaaacactgagacagtctctgaattactcaagaaatggtggtggacctattagccagaggggcggatatattgaaccaagagcgtgtgctgcagttggacagggaggtctggtatctttgtatgaaaccatgttcaatcaatatggaatttctgttgcccaggtgcttgttacaaagccagacttcaaggatgcatattgcagagcaaatttgaagacaacattagaagaattattgaaaatgcattgcattccaattgtaaatgcaaatgatgttgttgctccaccaccaagtcaagatattgatctgcaagggctgacacctcgccagcaaacggtcatcagtctcaaggacaatgacagtttagctgccttatttgcagtagaaatgaatgctgatttgttaattctcctctctgacgttgatggcatttatactggtcccccagatcaagagaactctcgcctgattgatgtatttaggcctggagatatcgaaaatgtcaaatttggtggaaagtcaagggttggtttaggaggcatggaatccaaggtccgtgctgcgacatgggcacttgagaataattgtgctgttgtgattgcaaatggagaatttaaagatgctaatattatcaaacatattgtaaatggcagaagaatcggaacatttttcacccttgcagaaaaagttggtgcttcacttgaagaccaagcagccaaagcacgagaaggaagcagagcacttcaagctctttctcctaaccagagagcagaaatcatctaccgtttatcagaattgctgctagaaagacaacaagacattttaaatgcaaatcaacgagatttagatgctgccagaattgcgggaaatctcgctgcaccccttttgtcacgtcttgctttatcagccagtaaaataaaaacattgtccgatggcctaaaacaaatcgcagacgactcttttgacaatgttggacgacttctcaaggcgacacgacttgctgatggactagaattgaaccaggtcactgtaccaattggtgttcttatggttatatttgaatccagaccagatgctttacctcaggttgcagcgttggcaattgcttctgcgaatggattattattaaaagggggaaaagaagcctaccattctaacaattatttgttttctttggttcaagaagctctttcaattcatggtgcagaaggatgtcctcatgccactgccttaataagtacccgtgatgacgtcagcgacttattacagttagagaactgtattgatttggtcatcccacgtggttcaaatgaaatgattcgaaagattcaaaatgaaagtaatcatattccagttcttggtcattctgaaggaatctgtcatgtttatgttgataaagatgctgatttagaaatggccttgcaaatcgttattgatgcgaaatgtgactatccagccgcatgtaatgctatggaaacacttttggttcacagagaacttttaagaacatcggcatttgatcaaattttggatgaattaagaaataataatgtaattgttcatgctggaccccgtctctcaaaagccttaccatttggaccagtaccagcaaaatcattgaaactagaatatggttcacttgaatgtgccatggaaattgttgatgacgtcgaagatgcaataagacatgttaatgcacatggaagttctcatactgaagctatcgtcactgaaaacgatcgaattgcacaaagatttcttcaaggaatcgatagcgcatgcgtattccacaatgcaagcacacgtttcgcagatggatatagatttggcttaggagctgaagttggcataagcacaacaagaatacatgcacgtggtccagtcggtgttgaaggattattgacaacaaaatggctgcttaaaggagatgggcatacggtcacccagtttaatgaaggcggcaaatgcaaatttttacatgagccattagaagttgatccaggagcttttaatgcaaggactgctaatgaatgatttgtattgggggtaatgtgtttattctcgtagttatattttgagtatagatattttgattgtagtaagaagtgtattcagaggacataaccaaatggacacttgctaccagcactacctccatatcgtagtgacaagtgactacacttgtaccgtgtttccaggatatatgaaactcatgtgagtttaacctccgatgtttattttgagtaaagctagttttggacgtttttttgcaggaggcaaggaaattggttcttgctaccaatatggccttcatatcgtaatatttactgactataaagttatgtatttggttttccgctttcataaatcagacttcgcgctttttatgtaatgattgcaatgtaaaggaagataacactgagtgagacttgtcataaaaacacattattttctaattactaaatgaaaacatttaatcttttctatgtaagtgaatggaggagtcatgtttctccccaaacttttgaggacttagtacaactatgtggttagattggttacctaagtcccttttatccctgggacattattcaagtcaaagagcacagaaaaacaaaggataagtctatatttggtaggggaactatttcatcttcggaatagtaaggactgttactgccggaatcttattatagctgctttgtaagcatttgcagcagaaacgagtatttatgaccaagcctttcctgctgattttagttgtaataaactcctagagaatgtctagttatagtttttttgcgataacagatgacttgtatgatatggatgcaatcctttagtagcacctgttgtgttgtcactgtgatatgacaagacaacgttttcattttcttaatacattgtttttgagaatactttgggatttagagatcaggctaatagaacttgatcctagcttctttcttattcatattttataaatattgctgtatgtggtagatcgtatttattatttatatattcatccatccttgactatagcctagaatatttaacgtaacaagataatgggtatcaaatatgtttcataagaaattgcttgttatttg

Transcript

scaffold82.g7.t2

CAAATGCTAGGTGGCAGGTATCCTCAGTGTTCATTTGACTGCAGGCAGCCGGAGGGAAGGGACAAATACTCTGAGATAGAAGCAAATGAAACACTTATAATTTATGAAATATAACGCAAAGATGTTTACTAGAATATTATCATCAAGGATACGATCCTGTTCAAACTGTTTATCAAGACAAAATGTGTTACCAGTTGGTGGATTTTCACGAAGTATGGTCGTGGTGCCTGGAGGCCCGCAAAAGAAAACAGCACTTGACTTCAGAAATCAGTTGAAAAATGCGAAAAGAATTGTCGTCAAACTTGGATCAGCAGTTGTAACAAGAGATGATGAATGTGGTGTAGCATTGGGAAGACTTGCTGCCATTGTTGAACAGGTTTCAGAACTTCAAAATACTGGCAAACAAATGATGGTTGTCACAAGTGGTGCTGTTGCATATGGTAAACAAAGGCTGAGAGGAGAAATGTCAATGCAACAAACACTGAGACAGTCTCTGAATTACTCAAGAAATGGTGGTGGACCTATTAGCCAGAGGGGCGGATATATTGAACCAAGAGCGTGTGCTGCAGTTGGACAGGGAGGTCTGGTATCTTTGTATGAAACCATGTTCAATCAATATGGAATTTCTGTTGCCCAGGTGCTTGTTACAAAGCCAGACTTCAAGGATGCATATTGCAGAGCAAATTTGAAGACAACATTAGAAGAATTATTGAAAATGCATTGCATTCCAATTGTAAATGCAAATGATGTTGTTGCTCCACCACCAAGTCAAGATATTGATCTGCAAGGGCTGACACCTCGCCAGCAAACGGTCATCAGTCTCAAGGACAATGACAGTTTAGCTGCCTTATTTGCAGTAGAAATGAATGCTGATTTGTTAATTCTCCTCTCTGACGTTGATGGCATTTATACTGGTCCCCCAGATCAAGAGAACTCTCGCCTGATTGATGTATTTAGGCCTGGAGATATCGAAAATGTCAAATTTGGTGGAAAGTCAAGGGTTGGTTTAGGAGGCATGGAATCCAAGGTCCGTGCTGCGACATGGGCACTTGAGAATAATTGTGCTGTTGTGATTGCAAATGGAGAATTTAAAGATGCTAATATTATCAAACATATTGTAAATGGCAGAAGAATCGGAACATTTTTCACCCTTGCAGAAAAAGTTGGTGCTTCACTTGAAGACCAAGCAGCCAAAGCACGAGAAGGAAGCAGAGCACTTCAAGCTCTTTCTCCTAACCAGAGAGCAGAAATCATCTACCGTTTATCAGAATTGCTGCTAGAAAGACAACAAGACATTTTAAATGCAAATCAACGAGATTTAGATGCTGCCAGAATTGCGGGAAATCTCGCTGCACCCCTTTTGTCACGTCTTGCTTTATCAGCCAGTAAAATAAAAACATTGTCCGATGGCCTAAAACAAATCGCAGACGACTCTTTTGACAATGTTGGACGACTTCTCAAGGCGACACGACTTGCTGATGGACTAGAATTGAACCAGGTCACTGTACCAATTGGTGTTCTTATGGTTATATTTGAATCCAGACCAGATGCTTTACCTCAGGTTGCAGCGTTGGCAATTGCTTCTGCGAATGGATTATTATTAAAAGGGGGAAAAGAAGCCTACCATTCTAACAATTATTTGTTTTCTTTGGTTCAAGAAGCTCTTTCAATTCATGGTGCAGAAGGATGTCCTCATGCCACTGCCTTAATAAGTACCCGTGATGACGTCAGCGACTTATTACAGTTAGAGAACTGTATTGATTTGGTCATCCCACGTGGTTCAAATGAAATGATTCGAAAGATTCAAAATGAAAGTAATCATATTCCAGTTCTTGGTCATTCTGAAGGAATCTGTCATGTTTATGTTGATAAAGATGCTGATTTAGAAATGGCCTTGCAAATCGTTATTGATGCGAAATGTGACTATCCAGCCGCATGTAATGCTATGGAAACACTTTTGGTTCACAGAGAACTTTTAAGAACATCGGCATTTGATCAAATTTTGGATGAATTAAGAAATAATAATGTAATTGTTCATGCTGGACCCCGTCTCTCAAAAGCCTTACCATTTGGACCAGTACCAGCAAAATCATTGAAACTAGAATATGGTTCACTTGAATGTGCCATGGAAATTGTTGATGACGTCGAAGATGCAATAAGACATGTTAATGCACATGGAAGTTCTCATACTGAAGCTATCGTCACTGAAAACGATCGAATTGCACAAAGATTTCTTCAAGGAATCGATAGCGCATGCGTATTCCACAATGCAAGCACACGTTTCGCAGATGGATATAGATTTGGCTTAGGAGCTGAAGTTGGCATAAGCACAACAAGAATACATGCACGTGGTCCAGTCGGTGTTGAAGGATTATTGACAACAAAATGGCTGCTTAAAGGAGATGGGCATACGGTCACCCAGTTTAATGAAGGCGGCAAATGCAAATTTTTACATGAGCCATTAGAAGTTGATCCAGGAGCTTTTAATGCAAGGACTGCTAATGAATGATTTGTATTGGGGGTAATGTGTTTATTCTCGTAGTTATATTTTGAGTATAGATATTTTGATTGTAGTAAGAAGTGTATTCAGAGGACATAACCAAATGGACACTTGCTACCAGCACTACCTCCATATCGTAGTGACAAGTGACTACACTTGTACCGTGTTTCCAGGATATATGAAACTCATGTGAGTTTAACCTCCGATGTTTATTTTGAGTAAAGCTAGTTTTGGACGTTTTTTTGCAGGAGGCAAGGAAATTGGTTCTTGCTACCAATATGGCCTTCATATCGTAATATTTACTGACTATAAAGTTATGTATTTGGTTTTCCGCTTTCATAAATCAGACTTCGCGCTTTTTATGTAATGATTGCAATGTAAAGGAAGATAACACTGAGTGAGACTTGTCATAAAAACACATTATTTTCTAATTACTAAATGAAAACATTTAATCTTTTCTATGTAAGTGAATGGAGGAGTCATGTTTCTCCCCAAACTTTTGAGGACTTAGTACAACTATGTGGTTAGATTGGTTACCTAAGTCCCTTTTATCCCTGGGACATTATTCAAGTCAAAGAGCACAGAAAAACAAAGGATAAGTCTATATTTGGTAGGGGAACTATTTCATCTTCGGAATAGTAAGGACTGTTACTGCCGGAATCTTATTATAGCTGCTTTGTAAGCATTTGCAGCAGAAACGAGTATTTATGACCAAGCCTTTCCTGCTGATTTTAGTTGTAATAAACTCCTAGAGAATGTCTAGTTATAGTTTTTTTGCGATAACAGATGACTTGTATGATATGGATGCAATCCTTTAGTAGCACCTGTTGTGTTGTCACTGTGATATGACAAGACAACGTTTTCATTTTCTTAATACATTGTTTTTGAGAATACTTTGGGATTTAGAGATCAGGCTAATAGAACTTGATCCTAGCTTCTTTCTTATTCATATTTTATAAATATTGCTGTATGTGGTAGATCGTATTTATTATTTATATATTCATCCATCCTTGACTATAGCCTAGAATATTTAACGTAACAAGATAATGGGTATCAAATATGTTTCATAAGAAATTGCTTGTTATTTG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00696 all species →	AA_kinase	Amino acid kinase family	Family	Interproscan
PF00171 all species →	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016163 all species →	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR001057 all species →	Family	Glutamate/acetylglutamate kinase	Interproscan
IPR005715 all species →	Family	Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase	Interproscan
IPR000965 all species →	Domain	GPR domain	Interproscan
IPR016162 all species →	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR001048 all species →	Domain	Aspartate/glutamate/uridylate kinase	Interproscan
IPR041744 all species →	Domain	Bifunctional delta 1-pyrroline-5-carboxylate synthetase, glutamate-5-kinase domain	Interproscan
IPR015590 all species →	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR036393 all species →	Homologous_superfamily	Acetylglutamate kinase-like superfamily	Interproscan
IPR005766 all species →	Family	Delta l-pyrroline-5-carboxylate synthetase	Interproscan
IPR019797 all species →	Conserved_site	Glutamate 5-kinase, conserved site	Interproscan
IPR016161 all species →	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11063 all species →	GLUTAMATE SEMIALDEHYDE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016620 all species →	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan
GO:0004350 all species →	Molecular Function	glutamate-5-semialdehyde dehydrogenase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006561 all species →	Biological Process	proline biosynthetic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0004349 all species →	Molecular Function	glutamate 5-kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12657	ALDH18A1, P5CS; delta-1-pyrroline-5-carboxylate synthetase	EC:2.7.2.11 EC:1.2.1.41	Arginine and proline metabolism	ko00330	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.