Gene detail

Detailed information of scaffold86.g56.t1 in Morbakka virulenta

Genomic Location: scaffold86:2283581...2288067
NR annotation: KAI9528346.1, Crooked neck-like protein 1 [Dissostichus eleginoides]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q7SGD2	Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=clf-1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02184	HAT	HAT (Half-A-TPR) repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR045075	Family	Pre-mRNA-splicing factor Syf1-like	Interproscan
IPR003107	Repeat	HAT (Half-A-TPR) repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11246	PRE-MRNA SPLICING FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000245	Biological Process	spliceosomal complex assembly	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0000974	Cellular Component	Prp19 complex	Interproscan
GO:0071007	Cellular Component	U2-type catalytic step 2 spliceosome	Interproscan
GO:0071011	Cellular Component	precatalytic spliceosome	Interproscan
GO:0071014	Cellular Component	post-mRNA release spliceosomal complex	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan