Genomic Location: scaffold86:65257...88355
NR annotation: XP_028418818.1, WD repeat-containing protein 36-like [Dendronephthya gigantea]
| CDS | |||||
| scaffold86.g6.t1 | |||||
| Transcript |
| scaffold86.g6.t1 |
| Protein |
| scaffold86.g6.t1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q8NI36 | WD repeat-containing protein 36 OS=Homo sapiens OX=9606 GN=WDR36 PE=1 SV=2 | ||||
| O14053 | U3 small nucleolar RNA-associated protein 21 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1672.07 PE=3 SV=1 | ||||
| Q06078 | U3 small nucleolar RNA-associated protein 21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP21 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF03184 | DDE_1 | DDE superfamily endonuclease | Family | Interproscan |
| PF04192 | Utp21 | Utp21 specific WD40 associated putative domain | Domain | Interproscan |
| PF03221 | HTH_Tnp_Tc5 | Tc5 transposase DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR006600 | Domain | HTH CenpB-type DNA-binding domain | Interproscan |
| IPR004875 | Domain | DDE superfamily endonuclease domain | Interproscan |
| IPR007319 | Domain | Small-subunit processome, Utp21 | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22840 | WD REPEAT-CONTAINING PROTEIN 36 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0032040 | Cellular Component | small-subunit processome | Interproscan |
| GO:0034388 | Cellular Component | Pwp2p-containing subcomplex of 90S preribosome | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14554 | UTP21, WDR36; U3 small nucleolar RNA-associated protein 21 | - | Ribosome biogenesis | ko03009 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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