Detailed information of scaffold879.g7.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold879:74472...89584
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Transcription factor familyCSD · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00644
all species →
PARPPoly(ADP-ribose) polymerase catalytic domainFamilyInterproscan
PF13086
all species →
AAA_11AAA domainDomainInterproscan
PF13087
all species →
AAA_12AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047187
all species →
DomainUpf1-like, C-terminal helicase domainInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002059
all species →
DomainCold-shock protein, DNA-bindingInterproscan
IPR012317
all species →
DomainPoly(ADP-ribose) polymerase, catalytic domainInterproscan
IPR045055
all species →
FamilyDNA2/NAM7-like helicaseInterproscan
IPR041677
all species →
DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR012340
all species →
Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR041679
all species →
DomainDNA2/NAM7 helicase-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10887
all species →
DNA2/NAM7 HELICASE FAMILYInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0003950
all species →
Molecular FunctionNAD+-protein poly-ADP-ribosyltransferase activityInterproscan
GO:0031048
all species →
Biological Processregulatory ncRNA-mediated heterochromatin formationInterproscan
GO:0031380
all species →
Cellular Componentnuclear RNA-directed RNA polymerase complexInterproscan
GO:0004386
all species →
Molecular Functionhelicase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K27391ZNFX1; NFX1-type zinc finger-containing protein 1-RIG-I-like receptor signaling pathwayko04622deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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