Gene detail

Detailed information of scaffold90.g31.t1 in Morbakka virulenta

Genomic Location: scaffold90:1240483...1263060
NR annotation: XP_047144455.1, hemocyte protein-glutamine gamma-glutamyltransferase [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold90.g31.t1

AGCGGATTCTTGAACCGTTTTGTTGTTGTTTCTTCAAGTTTTTTCTCTCCAAATATTTCAACTATGTCTCTGTCTGATTGTGCAAAGCAAAACACTCATAGAAAGACATTCTTAATTCTACTGTCTACCAAAGTATTTTTCATAAAATGCTCAATCACTGTGCAAGATACCGTCACAAAAAAGAGGTACAATTTCAATTGTAATAAATGGCTTGCTGAAGGTGATCGTTATTCTCTACAAGCTGTTTTATATTGCTCAGATGACAATAACTATACCATAACAACTGTTACTGGAAATAAACCAGAATCAGGAACAGATGCCCAAGTTTTTATCATTTTATATGGTGAAAATGGAGAAAGTCAAGAAATTCACTTAAAAGGCACTACACGAAATGATGTCTTTGAAAAAGGACAATCCGACGTCTTTCAAGTTACAGCCAAACCGTTAGGCATGTTGTACAAAGTAAAAATTTATCATGATTGCAGTGGATATAATCCATCCTGGTTTTTAAAGCGTGTTGAAGTAGAAGATAAACAGTCAAGACGTAGATATGTATTTCCGTGCAATACATGGTTGAAATGGGAAGGAAATTATTCTATAGAAGCCGAGCTGGAATTAAAAGATGCTCCAATAGTACAACTTGATCAGCTCAATGATAGAAACAAACCACGACATCATACTGAGAAATTTGACTCTGAAGACCTCATCATCAGAAGGGGTCAAACATTTGATATTGATATATCCTTAGCGCGTCCTTATGATTCCAAGAAAGATATCTTTGAGCTGACATTAGAAACAGGGAAAAAACCTCGTGAGAAAAACAAGACTTTGGTAACAATACCTTTGGTCGATGAATTTGATGATATGAACCAGAGATGGGGCTACAAAATCGTCTCTACTGAAATGTGTAAACTTGAAATAGAAGTCAATTGTCCAGCTGATGCACTTGTTTCTAAATATATATTAAAAGTTGAACGAGACGATGAAGTTATCTACACTCATGATAAATCGGTTTATATTCTTTTCAACCCATGGTGTGAAGAGGATGAAGTTTATATGAAAGGTGAAGACAAAAGAAAAGAATATGTCCTTAGACAACATGGTTGCATTTATGGTGGTTCCAGCAAAACACAAAATCCCAAAAAGTGGTATTTTGGACAGTTTGAAGACGTCGTTCTTGATCAAGTTTTCACCATTTTAACGGCCATTCCGGCGGCACAGCGAAAAACAGCTGTGGAAGTATCAAGGAAGGTGTCAGCGTTGGTGAATTCCAATGATGACGATGGAGTTCTTGTTGGAAATTGGTCTGGGAAGTATGAAGAAGGCAAATCACCTCTTTTTTGGGTCAGTTCACCACCCATCTTTGATACATTTTCAAATGACAAGGCTCCAGTGAAGTTTGGCCAATGCTGGGTATTTAGTGCTCTTGTAACTACTGTGATGCGTTGTCTTGGTATTCCTTGCCGTCCAGTTACAAACTTTAATTCTGCGCATGACACTAACAAAAATTCAAGTCACGATATTTTTCTCGATAAAGATGGAGAAATTTTGGATAATGCATCAAATGACTCCATTTGCGAGATCATTCTAGCTTAGAATGCAATTCCTCGTTCTGTGAAAGAAACATGCTCACactgacataaaaatgttcccgttgtaacgttttgatgtggaaaaaaagagatgactctttaatcatgactacctcatggtcatccttgagaaaagtgtagtacttgtactacacttctcggccttttggctaagatcaagtgtagagctctggtctctccttggtcgggtctacagctatagggcccaaacacacaggagaggtcgtcttgaggtgcttgagctttggctgatgaccaacccaggagaaaggaccttcctacggagggtcctggaggggcgatccgtatgtcttgcattttatggtgtcttgcacgctttctgtccctctttttcttgatctgctccttccgttcgggtctttcatagatggatatctgtgaaagacaaaatgggcccactgtttaccaggggttccatcaatgaaagacccagtatctg

Protein

Uniprot

Uniprot term	Description
Q8BH61	Coagulation factor XIII A chain OS=Mus musculus OX=10090 GN=F13a1 PE=1 SV=3
O08619	Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3
P00488	Coagulation factor XIII A chain OS=Homo sapiens OX=9606 GN=F13A1 PE=1 SV=5

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01841	Transglut_core	Transglutaminase-like superfamily	Family	Interproscan
PF00868	Transglut_N	Transglutaminase family	Domain	Interproscan
PF01477	PLAT	PLAT/LH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002931	Domain	Transglutaminase-like	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR050779	Family	Protein-glutamine gamma-glutamyltransferases	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR001102	Domain	Transglutaminase, N-terminal	Interproscan
IPR036985	Homologous_superfamily	Transglutaminase-like superfamily	Interproscan
IPR001024	Domain	PLAT/LH2 domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036392	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11590	PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003810	Molecular Function	protein-glutamine gamma-glutamyltransferase activity	Interproscan
GO:0018149	Biological Process	peptide cross-linking	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan