Detailed information of scaffold90.g6.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold90:112540...114724
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17121
all species →		zf-C3HC4_5Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF06391
all species →		MAT1CDK-activating kinase assembly factor MAT1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR004575
all species →		FamilyCdk-activating kinase assembly factor MAT1/Tfb3Interproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR015877
all species →		DomainCdk-activating kinase assembly factor MAT1, centreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12683
all species →		CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005675
all species →		Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0045737
all species →		Biological Processpositive regulation of cyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0061575
all species →		Molecular Functioncyclin-dependent protein serine/threonine kinase activator activityInterproscan
GO:0000079
all species →		Biological Processregulation of cyclin-dependent protein serine/threonine kinase activityInterproscan
GO:0006281
all species →		Biological ProcessDNA repairInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10842MNAT1; CDK-activating kinase assembly factor MAT1-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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