Detailed information of scaffold923.g7.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold923:63906...90314
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17849
all species →
OB_Dis3Dis3-like cold-shock domain 2 (CSD2)DomainInterproscan
PF17216
all species →
Rrp44_CSD1Rrp44-like cold shock domainDomainInterproscan
PF00773
all species →
RNBRNB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050180
all species →
FamilyRNR RibonucleaseInterproscan
IPR001900
all species →
DomainRibonuclease II/RInterproscan
IPR012340
all species →
Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR041505
all species →
DomainDis3-like cold-shock domain 2Interproscan
IPR033771
all species →
DomainRrp44-like cold shock domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23355
all species →
RIBONUCLEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000175
all species →
Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000176
all species →
Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000177
all species →
Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0004519
all species →
Molecular Functionendonuclease activityInterproscan
GO:0016075
all species →
Biological ProcessrRNA catabolic processInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0004540
all species →
Molecular FunctionRNA nuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold923.g7.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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