Gene detail

Detailed information of scaffold935.g2.t2 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold935:4416...37162
NR annotation: no NCBI-NR hit recorded
Species abbreviation AAURI2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

scaffold935.g2.t2

agtaccaaacgatgcattgggacttccccgtgtgaaggaatcccctccaaagtacaaagttctcccatatttgcattggaattgaaattctttgcaagctgtgactcaggatcttttcattgatcagccttggaagcacaagattcctgaaagttgcaagagctaaacacaaggaaggatttgttgtgatcaaagtatttgcaattcatgatccatcattgcctctcaaagtctaccaagatcaaatatcatcaattaaaagaaggttgtcaggtttagcaaatgttctgccctttcaaggagctttactcactgacaaagctggcttgttgtttaggcaatatgttcatgataatctttatgacaggataagtactcgcccattcttaaatcttgtcgagaagaagtggattgtattccaactattgtgcgctttggagcaagcacattctgccaagatataccatggagatatcaaatcagaaaatattcttgtcacaagttggaattgggttttactcacagatattgcaagtttcaaaccagtttgtctccctgtggacaacccagctgactacaactacttctttgatacatcacgcagacgaacttgctacatcgcacctgaacgattcataggtacaggccagaagtatactgattcactgaattcaagccaatcagatggagatgttaagccaggaaccagtcccacaactccacttcttgatatgcctgttactgaacaaagcgagatgacatatgctatggatatcttctctgcaggatgcgtgattgctgaattgttttgtgaaggcagtccattattcgacttggctcagcttttggcatacaaaagtggtgattatagtccagaagtaaaattgagcaaaattgacaacaacatcaaggaaatgataaaacatatgatatcaaaagatccatccgaaagattatcagcaaaagaatacatgaatacgtatagaggacatgtcttccctgaagaattctacactttcctgagaagcttcttcactaagtttactggtaccccagttctgacacctgatgaaaagattatgaggatccataaagatttgaaaaatatcaaggaggcactgttgccacacacagcggaaggcgaggaagagagaaaagaactaccggaagctgacaattgctttgtgatgttatgcacactcataacttcaacgatacgaagcttaaagttcacacaatcaaaactaatttcccttgatctgatgcttgaaatggctcattacgtcagcgatgatgtcatcctggaacgtcttctgccttacatgttccacctagtcacagatgacgtaccacgagtgcgtgcgcatacaatatctacgatcaccaactgcctccgtttggttaaaaatgtgcctcggaatgaaggcaatatatttcccgaatacatactgccgaatctgaactacctaacaaatgacccggaagttatcgttcaagttgcccttgctgaaaacattgcaacccttgcggaaacagctctcaggttcttggaaatcgtgcagcttaacatgctgaattctgccaatcaagaaaaggagacacagttccagtatcagggtagctacgatgttgagctccaagcactgcatgagttgattcaaagtaaagtcacatcactgttaactaactcagagaacatagtgaaacgaacacttttagagaaaggcctaacaaggctatgtgtgttctttggccgtcagaaagccaacggagtacttctatcgcatatcattacattcttgaatgacaaaacagactggcagctgcgaggagcatttttcgatacgattgttggagtggctgcatatattgggatgcaaagtatgaatatattgacaccactgttacagcaaggactcaaagatactgaagaatttgtcatctgcaaagtgattcatgctcttacatgcctgacacagctatgtcttcttcaaaaacctacattgcaagattttattgaggaagttgtgccatatttatgtcatccaaacgactggattcgctatactgcagctggatttatttctgcatgtgcaaagattatgaatgttgccgatgtttattgttgtttgatgcctgctgtgaaaccatacctaaaaatgccgattatcgaactgcaaaatgagacaattctgctaagtctgttgaaagacccaataccaagacctgtgtatgattcgcttgcaaagtcacaatatacaagggatatcatgaaacggtaagacttgcaattttattataatttaggcaagtcttagataacgtggccgtgaaaccggcactagttttaaaaggttaaaaaagtaacggtggcaaa

Transcript

scaffold935.g2.t2

agtaccaaacgatgcattgggacttccccgtgtgaaggaatcccctccaaagtacaaagttctcccatatttgcattggaattgaaattctttgcaagctgtgactcaggatcttttcattgatcagCCTTGGAAGCACAAGATTCCTGAAAGTTGCAAGAGCTAAACACAAGGAAGGATTTGTTGTGATCAAAGTATTTGCAATTCATGATCCATCATTGCCTCTCAAAGTCTACCAAGATCAAATATCATCAATTAAAAGAAGGTTGTCAGGTTTAGCAAATGTTCTGCCCTTTCAAGGAGCTTTACTCACTGACAAAGCTGGCTTGTTGTTTAGGCAATATGTTCATGATAATCTTTATGACAGGATAAGTACTCGCCCATTCTTAAATCTTGTCGAGAAGAAGTGGATTGTATTCCAACTATTGTGCGCTTTGGAGCAAGCACATTCTGCCAAGATATACCATGGAGATATCAAATCAGAAAATATTCTTGTCACAAGTTGGAATTGGGTTTTACTCACAGATATTGCAAGTTTCAAACCAGTTTGTCTCCCTGTGGACAACCCAGCTGACTACAACTACTTCTTTGATACATCACGCAGACGAACTTGCTACATCGCACCTGAACGATTCATAGGTACAGGCCAGAAGTATACTGATTCACTGAATTCAAGCCAATCAGATGGAGATGTTAAGCCAGGAACCAGTCCCACAACTCCACTTCTTGATATGCCTGTTACTGAACAAAGCGAGATGACATATGCTATGGATATCTTCTCTGCAGGATGCGTGATTGCTGAATTGTTTTGTGAAGGCAGTCCATTATTCGACTTGGCTCAGCTTTTGGCATACAAAAGTGGTGATTATAGTCCAGAAGTAAAATTGAGCAAAATTGACAACAACATCAAGGAAATGATAAAACATATGATATCAAAAGATCCATCCGAAAGATTATCAGCAAAAGAATACATGAATACGTATAGAGGACATGTCTTCCCTGAAGAATTCTACACTTTCCTGAGAAGCTTCTTCACTAAGTTTACTGGTACCCCAGTTCTGACACCTGATGAAAAGATTATGAGGATCCATAAAGATTTGAAAAATATCAAGGAGGCACTGTTGCCACACACAGCGGAAGGCGAGGAAGAGAGAAAAGAACTACCGGAAGCTGACAATTGCTTTGTGATGTTATGCACACTCATAACTTCAACGATACGAAGCTTAAAGTTCACACAATCAAAACTAATTTCCCTTGATCTGATGCTTGAAATGGCTCATTACGTCAGCGATGATGTCATCCTGGAACGTCTTCTGCCTTACATGTTCCACCTAGTCACAGATGACGTACCACGAGTGCGTGCGCATACAATATCTACGATCACCAACTGCCTCCGTTTGGTTAAAAATGTGCCTCGGAATGAAGGCAATATATTTCCCGAATACATACTGCCGAATCTGAACTACCTAACAAATGACCCGGAAGTTATCGTTCAAGTTGCCCTTGCTGAAAACATTGCAACCCTTGCGGAAACAGCTCTCAGGTTCTTGGAAATCGTGCAGCTTAACATGCTGAATTCTGCCAATCAAGAAAAGGAGACACAGTTCCAGTATCAGGGTAGCTACGATGTTGAGCTCCAAGCACTGCATGAGTTGATTCAAAGTAAAGTCACATCACTGTTAACTAACTCAGAGAACATAGTGAAACGAACACTTTTAGAGAAAGGCCTAACAAGGCTATGTGTGTTCTTTGGCCGTCAGAAAGCCAACGGAGTACTTCTATCGCATATCATTACATTCTTGAATGACAAAACAGACTGGCAGCTGCGAGGAGCATTTTTCGATACGATTGTTGGAGTGGCTGCATATATTGGGATGCAAAGTATGAATATATTGACACCACTGTTACAGCAAGGACTCAAAGATACTGAAGAATTTGTCATCTGCAAAGTGATTCATGCTCTTACATGCCTGACACAGCTATGTCTTCTTCAAAAACCTACATTGCAAGATTTTATTGAGGAAGTTGTGCCATATTTATGTCATCCAAACGACTGGATTCGCTATACTGCAGCTGGATTTATTTCTGCATGTGCAAAGATTATGAATGTTGCCGATGTTTATTGTTGTTTGATGCCTGCTGTGAAACCATACCTAAAAATGCCGATTATCGAACTGCAAAATGAGACAATTCTGCTAAGTCTGTTGAAAGACCCAATACCAAGACCTGTGTATGATTCGCTTGCAAAGTCACAATATACAAGGGATATCATGAAACGGTAAGACTTGCAATTTTATTATAATTTAGGCAAGTCTTAGATAACGTGGCCGTGAAACCGGCACTAGTTTTAAAAGGTTAAAAAAGTAACGGTGGCAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR045162 all species →	Family	Serine/threonine-protein kinase Vps15-like	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17583 all species →	PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005770 all species →	Cellular Component	late endosome	Interproscan
GO:0006623 all species →	Biological Process	protein targeting to vacuole	Interproscan
GO:0016236 all species →	Biological Process	macroautophagy	Interproscan
GO:0030242 all species →	Biological Process	autophagy of peroxisome	Interproscan
GO:0034271 all species →	Cellular Component	phosphatidylinositol 3-kinase complex, class III, type I	Interproscan
GO:0034272 all species →	Cellular Component	phosphatidylinositol 3-kinase complex, class III, type II	Interproscan
GO:0045324 all species →	Biological Process	late endosome to vacuole transport	Interproscan
GO:0071561 all species →	Cellular Component	nucleus-vacuole junction	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold935.g2.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.