Gene detail

Detailed information of scaffold94.g55.t1 in Morbakka virulenta

Genomic Location: scaffold94:2231419...2268626
NR annotation: KAJ7374142.1, Protein phosphatase Slingshot 3 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

scaffold94.g55.t1

tttaatcctctgtaattacctctttctagagcttctccttttcctttgtaacaattgataattgtacttatttcccagtcctcaggaatgacaccatctcttatgatctgatttgttagatcagtgatcatctctatacttctttcacctgcagctttgaccatctctgccacaattcctgaatggccagctgctttgcctttcttcattttctttacagcttccctcaccatttctttctcaataaaaatggctggtccagatactgtttctacctctccaagattttctctatcccaagaaaactctgtgttcaacaatctctcataatagcacttccaggcattcttcttttcaagttcacttgttgcaagttctccatcatcattcctgatacacttttctccaatgatatcctgattagtcttgatcatctgcttagctatcttgaatacttcattcttctggtcatctctacacattatgtctggaaaccttcttttctcggcatccatctttgctttgtagattgcttgcctagctactctcttggcctccagatacctttctttgttaactaacccctttttccattgactccacagccttctcttctctttcacataattttcaacagaagtattccaccaccatgtcactctatgacgtggaggcccttttgtccagccacagacttggtctgtggcttttaaaagtgtatccttgatcttctcccattgctcttctacactttgtaggtcttttcctggactagcacccacaattccattcacttgatcttcaaaggcctgctttacttgtccatcatttagtctccacacctttctccttgggatatactttcttttcactttatgtactttcttaatcctgaagtcacaaattactggcttatgctgggtcacaaattcttcaccaggtatcacttttacatcttgcaaatacttcctgtcttttgtctttaccaaaatgtagtccacttgagtcatagctgtcccagactcataggttaccagatggctattccttttcttaaaaatagtattcgccaccaacatgtccatggcaagtccaaactctagaattctttcaccctccttatttcggtcaccatatccatttcctccatggactccctcaaacccagatgctgttcttccaacatggccatttagatcacctgcaatagcaacaatttctttctctgccagcttaccagtgactgcaatgagactgtcatagaattcatccttgacttcttcacttaagccacattgtggtgcatacactgatattgctgtgaagattgtctcacctatcatcagtttaatcagcataattcgatcatttatgcgtttgacatcaatcaccttgtctatccatttctctgcaacaaagatacctacaccacctgtgccttttccattaccaatccaaaacagcttACCAAGTTTTGAAGGCTATTTTGCATCCAAAAGTGGAGCATTTGCATTATCCAATGGAAATTTAGCAAGGAGTGAAAGTACAAAGACTTGTGGTGAGCTACAATTCCACTTGCAAAGAATGGTAACTTTGCTGAGAACAGGTGATGCTCTTAAAATGGCAGTAAGGCTAGAAAGTCAAATTCCACGACGAAAACGTTACCTTGCCCTCGTGACAAGTTCACATGATTCTTTTTCAGCGATTTTAGGAATTGATTGGGTTGAAAGGCCAACAATTGGTCTTATACTTCCCATCTTCAGTTCAAGCACTGTGACGTTAGATGGTGATGGTGGTTTTCATATCAAATCCGACGTATCACATGGACACATGTTTAAGCCTGTCTCAGTGCAGATGCTTTGGTCGGCTATTCATGTTACTTACAAGGCAATTGAGTTGGCAAGGAGATTCAATTACTTTTCAAGTGGACAGACTAACGAGCTGGTTAGTCACTACAATTCGATGCTGCGTTCTGACAGCTCTTGCATCACAGAATGGAACCTTTTAGAAGGGGTGGAGTCTAGGTCAAGTTTGGACTTAATGCTGTCAGATCAAGAAGAGGCAGAAATTGTCATGTTGAAAAAACTCATAACGCAAAAGTTAAGAGAGGTGATGATGAAGGTTGATTTAGATGATATTACTGCAAGAGAGATCCGGATGAGAGTAGAAGAAGAGCTCAATATGGATCTAAGGGAACATAAGGGGTATGTGGATGAAGAAATGCTAACCATACTGGGCCAGATGGACTCTGCATCTAAAATTATGGATTATCTTTACCTGGGATCGGAATGGAATGCTTCCTACTATGATGAGCTAATGGAGATTGGAATTGGGTATGTTCTGAATGTGACAAGGGAGATAGACAATTTTTTCCCTGGATCGTTTGTTTATTACAACGTAAGGGTGGAAGACGTTGAGGAATCCGATCTGTTGCATCATTGGGATCACACCTACAGATTTATCAATCAAGCAAGAGAGGCAGGGTCAAAAGTTTTGGTACATTGCAGAATGGGGATAAGTCGTTCAGCTTCAACTGTTATTGCATATTTGATGAAGTGCGAAGGCTGGTGCCTTACACAATGCATTGAACATGTACGAAATTGCAGGAGTATAATTCAGCCTAATCCTGGGTTTCAAAAACAGTTGATTATTTATGAAGGTATTCTTAATTCGAGCCGAAACAGATACAGTGCACTTTTCCGTCAACGTTCAAAGTCCGATTTAAAAAGGCCTTCCAGCGTCGAACGAAAACGACAGATGTTTAGGAAGAGCAGGTCCAGCAAAGAGGCCATAGAAAACAATGGCGATAATGATATGGAAGAAGAAAACTATGATGTGAAGAGTAACGTAGGAAGGCCAGTGTCATGGTGTGGAACACCGTCTGCTAAAGAGCTTACAGGTTATGTTGAATGGAAACCAGAAAAAAGCAAGGAAAAGGTATCTTTAAATGGTATTAAAGAAGACCAGGTTAACAGAGAGGGGCCCACACCCACTGAAACGATGGAAGTTGACAGCGCAAAAGGAAAAAACGTAGAAACTGATGAAGAACCTATTAAAAAGGATATATCGGTTCAACGTGCAAAAACATTACCATTAAATATTTTTgaagcagacgaagaccaagaagaagaaggaggagaTTTTATTGGAGAACTTCCTCAGGTTGAGGGACGTTACCGACGTGGTCATTTAAAGCGACAGGTGACCGATGAAGATCTTGATTCCCTTATCTCTAAGGATGTTAAAGAAGAAAATGAAAGTTTGATGAAGCAAGCATCCATGGCATGTGAAATTAAGAATAAACTTATGCGAAGCCTGGAACAGGTTGGGCGAGTGACGAAACACAAGATGGACGAAGAGTTTTCAGTTGAAAGTATTATAAAACCATCTTCCCTTCGAAAATTGTCCAAAACACGACGTTTATCGATCGAGCGGCGTCAGTCATTGACTGAACAAGATCGACCTTCGGCCAGCCATCGCCCTAGAGCGCAAACAGAAGTTTTAAATCGATCCCCATTCCAGAAGCATAACCCACCAGTGGAAACCGCAGACGGGAAGCAGAAATCTTTCACTTTGACCTAGGCCTTCGAAAAGGGCCGCATTGGTGCAGCCAGATGAGGGAATTGAAATTAAGCCTTTGGATTTCAATGATAGTGATGTGACACCAGAAAAGAGTCCATTAGTAGGTGATGATAATTGCAAGTCAAATGGTATTGCAAAGAAAAAAGAAAGCAGATA

Protein

Uniprot

Uniprot term	Description
Q8WYL5	Protein phosphatase Slingshot homolog 1 OS=Homo sapiens OX=9606 GN=SSH1 PE=1 SV=2
Q76I79	Protein phosphatase Slingshot homolog 1 OS=Mus musculus OX=10090 GN=Ssh1 PE=1 SV=1
Q6NN85	Protein phosphatase Slingshot OS=Drosophila melanogaster OX=7227 GN=ssh PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00782	DSPc	Dual specificity phosphatase, catalytic domain	Domain	Interproscan
PF08766	DEK_C	DEK C terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000340	Domain	Dual specificity phosphatase, catalytic domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR020422	Domain	Dual specificity protein phosphatase domain	Interproscan
IPR014876	Domain	DEK, C-terminal	Interproscan
IPR043587	Family	Protein phosphatase Slingshot-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45864	SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0004721	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016791	Molecular Function	phosphatase activity	Interproscan
GO:0030036	Biological Process	actin cytoskeleton organization	Interproscan
GO:0030837	Biological Process	negative regulation of actin filament polymerization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14165	K14165; atypical dual specificity phosphatase	EC:3.1.3.16 EC:3.1.3.48	Protein phosphatases and associated proteins	ko01009	deepkoala