Gene detail

Detailed information of scaffold950.g1.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold950:23536...79968
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14779 all species →	BBS1	Ciliary BBSome complex subunit 1	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR028784 all species →	Family	Bardet-Biedl syndrome 1 protein	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR032728 all species →	Domain	Bardet-Biedl syndrome 1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20870 all species →	BARDET-BIEDL SYNDROME 1 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005113 all species →	Molecular Function	patched binding	Interproscan
GO:0005119 all species →	Molecular Function	smoothened binding	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005930 all species →	Cellular Component	axoneme	Interproscan
GO:0034464 all species →	Cellular Component	BBSome	Interproscan
GO:0061512 all species →	Biological Process	protein localization to cilium	Interproscan
GO:1905515 all species →	Biological Process	non-motile cilium assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for scaffold950.g1.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.