Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG000000130,217
30,260 sequences
147
58% PANTHER PTHR37984 PROTEIN CBG26694 17585/30217
OG000000318,803
18,821 sequences
148
54% PANTHER PTHR37984 PROTEIN CBG26694 10165/18803
OG000000417,574
17,592 sequences
148
60% PANTHER PTHR22955 RETROTRANSPOSON 10561/17574
OG000000715,397125
76% PANTHER PTHR33845 C2H2-TYPE DOMAIN-CONTAINING PROTEIN 11710/15397
OG000000913,842145
65% PANTHER PTHR23080 THAP DOMAIN PROTEIN 9065/13842
OG000001013,214
13,215 sequences
146
52% PANTHER PTHR22955 RETROTRANSPOSON 6927/13214
OG000001212,697
12,699 sequences
145
71% PANTHER PTHR19143 FIBRINOGEN/TENASCIN/ANGIOPOEITIN 9071/12697
OG000001312,596142
68% PANTHER PTHR46791 EXPRESSED PROTEIN 8502/12596
OG000001511,950
11,962 sequences
134
51% PANTHER PTHR46670 ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN 6116/11950
OG000001611,804121
89% Pfam PF12770 CHAT domain 10532/11804
OG000001711,650
11,653 sequences
149
52% PANTHER PTHR22906 PROPERDIN 6001/11650
OG000001811,528
11,532 sequences
125
81% PANTHER PTHR31511 PROTEIN CBG23764 9345/11528
OG000002010,551144
87% PANTHER PTHR24543 MULTICOPPER OXIDASE-RELATED 9151/10551
OG000002110,441145
90% Pfam PF00001 7tm_1 — 7 transmembrane receptor (rhodopsin family) 9404/10441
OG000002210,254
10,265 sequences
147
60% PANTHER PTHR37984 PROTEIN CBG26694 6179/10254
OG00000239,557145
55% PANTHER PTHR24416 TYROSINE-PROTEIN KINASE RECEPTOR 5229/9557
OG00000258,67489
78% Pfam PF20706 GT4-conflict — Family 4 Glycosyltransferase in conflict systems 6753/8674
OG00000278,559149
91% PANTHER PTHR24223 ATP-BINDING CASSETTE SUB-FAMILY C 7820/8559
OG00000298,415138
52% PANTHER PTHR46791 EXPRESSED PROTEIN 4351/8415
OG00000308,364143
70% PANTHER PTHR34615 PX DOMAIN-CONTAINING PROTEIN 5887/8364
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