Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG00002482,405111
53% PANTHER PTHR21446 DUF3504 DOMAIN-CONTAINING PROTEIN 1280/2405
OG00002492,393
2,394 sequences
144
62% PANTHER PTHR10127 DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING 1488/2393
OG00002502,377149
88% PANTHER PTHR11686 GAMMA GLUTAMYL TRANSPEPTIDASE 2083/2377
OG00002512,372144
76% PANTHER PTHR13723 ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE 1793/2372
OG00002532,335149
89% PANTHER PTHR11937 ACTIN 2071/2335
OG00002552,316133
65% GO GO:0005524 ATP binding [Molecular Function] 1499/2316
OG00002572,312144
94% Pfam PF00001 7tm_1 — 7 transmembrane receptor (rhodopsin family) 2170/2312
OG00002592,277147
77% Pfam PF00058 Ldl_recept_b — Low-density lipoprotein receptor repeat class B 1757/2277
OG00002602,273142
93% PANTHER PTHR11616 SODIUM/CHLORIDE DEPENDENT TRANSPORTER 2109/2273
OG00002612,268104
93% GO GO:0005515 protein binding [Molecular Function] 2102/2268
OG00002622,258145
87% PANTHER PTHR21255 T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN 1968/2258
OG00002632,252149
86% Pfam PF00046 Homeodomain 1928/2252
OG00002642,239147
79% Pfam PF00008 EGF-like domain 1759/2239
OG00002652,239137
75% PANTHER PTHR16146 INTELECTIN 1674/2239
OG00002662,237143
77% PANTHER PTHR10887 DNA2/NAM7 HELICASE FAMILY 1727/2237
OG00002672,234143
86% Pfam PF01410 COLFI — Fibrillar collagen C-terminal domain 1918/2234
OG00002682,233130
58% PANTHER PTHR33104 SI:DKEY-29D5.2 1291/2233
OG00002692,230145
90% PANTHER PTHR24060 METABOTROPIC GLUTAMATE RECEPTOR 2008/2230
OG00002722,219
2,220 sequences
126
67% PANTHER PTHR23022 TRANSPOSABLE ELEMENT-RELATED 1496/2219
OG00002732,218149
89% Pfam PF00025 Arf — ADP-ribosylation factor family 1973/2218
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