Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG010030422
100% PANTHER PTHR10131 TNF RECEPTOR ASSOCIATED FACTOR 2/2
OG010031422
50% GO GO:0004842 ubiquitin-protein transferase activity [Molecular Function] 1/2
OG010031822
100% Pfam PF00023 Ankyrin repeat 2/2
OG010032022
100% PANTHER PTHR24256 TRYPTASE-RELATED 2/2
OG010033722
50% PANTHER PTHR45134 - 1/2
OG010034822
50% PANTHER PTHR24416 TYROSINE-PROTEIN KINASE RECEPTOR 1/2
OG010036822
100% PANTHER PTHR47963 DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 2/2
OG010037222
50% Pfam PF12937 F-box-like 1/2
OG010037322
100% Pfam PF01153 Glypican 2/2
OG010037722
100% PANTHER PTHR13030 NUDIX HYDROLASE 2/2
OG010038222
100% PANTHER PTHR12809 MEDIATOR COMPLEX SUBUNIT 2/2
OG010038422
100% GO GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Molecular Function] 2/2
OG010039222
100% GO GO:0016020 membrane [Cellular Component] 2/2
OG010039322
50% PANTHER PTHR10822 GLYPICAN 1/2
OG010039622
100% PANTHER PTHR47385 CALPONIN 2/2
OG010040322
100% PANTHER PTHR24394 ZINC FINGER PROTEIN 2/2
OG010041722
100% GO GO:0000976 transcription cis-regulatory region binding [Molecular Function] 2/2
OG010041922
100% PANTHER PTHR11165 SKP1 2/2
OG010042722
100% KEGG K25722 PRG3 — Signaling proteins 2/2
OG010043222
100% PANTHER PTHR14499 POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING 2/2
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