Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG00003271,949147
88% PANTHER PTHR23430 HISTONE H2A 1720/1949
OG00003281,947145
91% PANTHER PTHR11537 VOLTAGE-GATED POTASSIUM CHANNEL 1770/1947
OG00003291,943142
88% PANTHER PTHR11486 FIBROBLAST GROWTH FACTOR 1707/1943
OG00003301,942145
75% Pfam PF01414 DSL — Delta serrate ligand 1457/1942
OG00003311,941149
91% PANTHER PTHR11388 ORGANIC ANION TRANSPORTER 1773/1941
OG00003321,932143
83% Pfam PF00812 Ephrin 1609/1932
OG00003331,919142
83% PANTHER PTHR10334 CYSTEINE-RICH SECRETORY PROTEIN-RELATED 1600/1919
OG00003341,919139
85% Pfam PF14752 RBP_receptor — Retinol binding protein receptor 1628/1919
OG00003361,906115
69% PANTHER PTHR46963 SIMILAR TO RIKEN CDNA E130308A19 1318/1906
OG00003381,888141
88% PANTHER PTHR24279 - 1667/1888
OG00003401,880147
88% PANTHER PTHR11675 N-ACETYLGALACTOSAMINYLTRANSFERASE 1653/1880
OG00003411,879108
73% PANTHER PTHR46963 SIMILAR TO RIKEN CDNA E130308A19 1367/1879
OG00003421,87799
94% PANTHER PTHR10981 BATTENIN 1759/1877
OG00003431,871143
89% PANTHER PTHR23282 APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. 1660/1871
OG00003451,863141
81% PANTHER PTHR19871 BETA TRANSDUCIN-RELATED PROTEIN 1515/1863
OG00003461,857100
94% PANTHER PTHR24246 OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR 1751/1857
OG00003471,848149
87% PANTHER PTHR11848 TGF-BETA FAMILY 1599/1848
OG00003481,836145
84% Pfam PF00106 adh_short — short chain dehydrogenase 1543/1836
OG00003491,835144
90% PANTHER PTHR12308 ANOCTAMIN 1646/1835
OG00003501,834101
91% Pfam PF01353 GFP — Green fluorescent protein 1676/1834
Go to page: of 1166 pages
TOP