Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG00003511,832108
60% PANTHER PTHR46564 TRANSPOSASE 1107/1832
OG00003521,823149
89% Pfam PF00250 Forkhead domain 1614/1823
OG00003541,821112
89% PANTHER PTHR24064 SOLUTE CARRIER FAMILY 22 MEMBER 1625/1821
OG00003551,820143
87% PANTHER PTHR10974 UNCHARACTERIZED 1586/1820
OG00003561,819145
89% PANTHER PTHR24060 METABOTROPIC GLUTAMATE RECEPTOR 1616/1819
OG00003571,816145
85% PANTHER PTHR11309 FRIZZLED 1537/1816
OG00003581,812113
85% PANTHER PTHR10751 GUANYLATE BINDING PROTEIN 1532/1812
OG00003591,804116
52% PANTHER PTHR45641 TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 940/1804
OG00003601,78295
89% PANTHER PTHR26392 MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED 1587/1782
OG00003621,777114
70% Pfam PF00385 Chromo (CHRromatin Organisation MOdifier) domain 1249/1777
OG00003631,768148
90% Pfam PF00125 Core histone H2A/H2B/H3/H4 1585/1768
OG00003641,766130
74% PANTHER PTHR37162 HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED 1307/1766
OG00003651,762144
91% PANTHER PTHR10217 VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL 1605/1762
OG00003661,762144
86% Pfam PF02140 Gal_Lectin — Galactose binding lectin domain 1517/1762
OG00003671,762148
88% PANTHER PTHR11071 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1544/1762
OG00003681,759148
83% Pfam PF00076 RRM_1 — RNA recognition motif 1462/1759
OG00003691,757149
92% PANTHER PTHR43243 INNER MEMBRANE TRANSPORTER YGJI-RELATED 1616/1757
OG00003701,756144
85% PANTHER PTHR47990 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1484/1756
OG00003711,756131
73% PANTHER PTHR22930 UNCHARACTERIZED 1286/1756
OG00003721,753116
82% PANTHER PTHR22930 UNCHARACTERIZED 1445/1753
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