Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG00000318,318145
91% Pfam PF00089 Trypsin 7596/8318
OG00000328,260133
69% PANTHER PTHR31751 SI:CH211-108C17.2-RELATED-RELATED 5680/8260
OG00000337,633
7,635 sequences
142
53% PANTHER PTHR22955 RETROTRANSPOSON 4067/7633
OG00000347,606146
52% PANTHER PTHR46289 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED 3963/7606
OG00000357,263
7,339 sequences
141
54% PANTHER PTHR21301 REVERSE TRANSCRIPTASE 3938/7263
OG00000367,197
7,198 sequences
146
82% GO GO:0004930 G protein-coupled receptor activity [Molecular Function] 5937/7197
OG00000377,092
7,094 sequences
141
77% PANTHER PTHR47018 CXC DOMAIN-CONTAINING PROTEIN-RELATED 5468/7092
OG00000386,992149
90% PANTHER PTHR11360 MONOCARBOXYLATE TRANSPORTER 6282/6992
OG00000396,877149
86% PANTHER PTHR10127 DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING 5890/6877
OG00000406,767
6,796 sequences
132
72% PANTHER PTHR35450 REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN 4859/6767
OG00000446,300
6,301 sequences
149
87% Pfam PF00071 Ras family 5489/6300
OG00000456,270
6,280 sequences
142
64% PANTHER PTHR21301 REVERSE TRANSCRIPTASE 4011/6270
OG00000466,269143
91% Pfam PF00001 7tm_1 — 7 transmembrane receptor (rhodopsin family) 5713/6269
OG00000476,200
6,203 sequences
144
72% PANTHER PTHR46599 PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 4487/6200
OG00000486,178129
50% Pfam PF20231 Family of unknown function (DUF6589) 3119/6178
OG00000496,136
6,138 sequences
139
66% Pfam PF20700 Mutator-like transposase 4035/6136
OG00000506,134145
65% PANTHER PTHR10877 POLYCYSTIN FAMILY MEMBER 4003/6134
OG00000516,131149
90% Pfam PF00046 Homeodomain 5534/6131
OG00000526,125132
75% PANTHER PTHR13710 DNA HELICASE RECQ FAMILY MEMBER 4587/6125
OG00000536,123117
69% Pfam PF01391 Collagen triple helix repeat (20 copies) 4204/6123
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