Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG00006781,04697
77% Pfam PF04089 BRICHOS domain 810/1046
OG00006801,043102
91% PANTHER PTHR24240 OPSIN 951/1043
OG00006811,039110
59% PANTHER PTHR23098 AGAP001331-PA-RELATED 618/1039
OG00006821,038101
56% GO GO:0004842 ubiquitin-protein transferase activity [Molecular Function] 579/1038
OG00006831,037127
76% Pfam PF00431 CUB domain 793/1037
OG00006851,036143
79% PANTHER PTHR18934 ATP-DEPENDENT RNA HELICASE 815/1036
OG00006861,035140
65% PANTHER PTHR28665 BEN DOMAIN-CONTAINING PROTEIN 3 675/1035
OG00006871,03483
80% PANTHER PTHR45695 LEUCOKININ RECEPTOR-RELATED 832/1034
OG00006881,032145
82% PANTHER PTHR44899 CAMK FAMILY PROTEIN KINASE 850/1032
OG00006911,029145
88% GO GO:0005509 calcium ion binding [Molecular Function] 909/1029
OG00006951,025102
87% GO GO:0005515 protein binding [Molecular Function] 887/1025
OG00006981,023134
85% PANTHER PTHR40743 NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE CONTAINING PROTEIN 867/1023
OG00006991,022145
90% PANTHER PTHR24340 HOMEOBOX PROTEIN NKX 921/1022
OG00007001,021137
52% PANTHER PTHR46927 AGAP005574-PA 534/1021
OG00007011,021143
87% PANTHER PTHR19139 AQUAPORIN TRANSPORTER 891/1021
OG00007021,019145
89% PANTHER PTHR21324 FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED 909/1019
OG00007041,017148
89% PANTHER PTHR10766 TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 902/1017
OG00007051,015120
72% Pfam PF05485 THAP domain 734/1015
OG00007061,011141
92% PANTHER PTHR13627 FUKUTIN RELATED PROTEIN 928/1011
OG00007071,01098
90% PANTHER PTHR32341 INTERFERON-INDUCIBLE GTPASE 904/1010
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