Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG000088484080
84% Pfam PF00041 fn3 — Fibronectin type III domain 705/840
OG0000885840141
88% PANTHER PTHR10199 THROMBOSPONDIN 743/840
OG0000886838126
83% Pfam PF00229 TNF(Tumour Necrosis Factor) family 695/838
OG0000887838129
57% Pfam PF00084 Sushi repeat (SCR repeat) 474/838
OG000088883799
53% PANTHER PTHR44329 SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 444/837
OG000088983666
89% Pfam PF00001 7tm_1 — 7 transmembrane receptor (rhodopsin family) 744/836
OG000089083570
66% Pfam PF13359 DDE_Tnp_4 — DDE superfamily endonuclease 550/835
OG0000891834146
84% PANTHER PTHR48041 ABC TRANSPORTER G FAMILY MEMBER 28 702/834
OG0000892833142
91% PANTHER PTHR16024 XK-RELATED PROTEIN 755/833
OG0000893831137
90% PANTHER PTHR20855 ADIPOR/PROGESTIN RECEPTOR-RELATED 749/831
OG0000895829147
86% PANTHER PTHR11347 CYCLIC NUCLEOTIDE PHOSPHODIESTERASE 713/829
OG0000896829139
89% PANTHER PTHR11844 METALLOPROTEASE INHIBITOR 738/829
OG000089782890
90% PANTHER PTHR23192 OLFACTOMEDIN-RELATED 748/828
OG0000899826110
82% Pfam PF01823 MACPF — MAC/Perforin domain 677/826
OG0000901824125
89% PANTHER PTHR11895 TRANSAMIDASE 735/824
OG0000902823115
84% PANTHER PTHR22984 SERINE/THREONINE-PROTEIN KINASE PIM 694/823
OG0000903823139
62% PANTHER PTHR21529 MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 512/823
OG0000904823143
74% PANTHER PTHR11085 NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED 610/823
OG0000905823144
90% PANTHER PTHR35170 PROTEIN DD3-3 742/823
OG000090682297
90% PANTHER PTHR24372 GLYCOPROTEIN HORMONE RECEPTOR 736/822
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