Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG0009085163113
87% PANTHER PTHR31817 - 142/163
OG0009086163127
83% PANTHER PTHR31305 SNARE-ASSOCIATED PROTEIN SNAPIN 135/163
OG0009087163118
85% PANTHER PTHR14224 SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 138/163
OG0009088163129
81% PANTHER PTHR16489 GH11727P 132/163
OG0009089163109
96% PANTHER PTHR43677 SHORT-CHAIN DEHYDROGENASE/REDUCTASE 157/163
OG000909016393
97% Pfam PF00001 7tm_1 — 7 transmembrane receptor (rhodopsin family) 158/163
OG000909116393
90% PANTHER PTHR15109 AGAP004327-PA 147/163
OG0009092163113
66% GO GO:0005515 protein binding [Molecular Function] 107/163
OG0009094163111
91% PANTHER PTHR15010 ACYLOXYACYL HYDROLASE 148/163
OG0009095163119
84% PANTHER PTHR13202 MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 137/163
OG0009096163114
88% Pfam PF12796 Ank_2 — Ankyrin repeats (3 copies) 144/163
OG0009097163129
85% Pfam PF15753 BLOC1S3 — Biogenesis of lysosome-related organelles complex 1 subunit 3 139/163
OG000909816351
58% PANTHER PTHR23257 SERINE-THREONINE PROTEIN KINASE 94/163
OG000910016368
84% Pfam PF00929 RNase_T — Exonuclease 137/163
OG0009101162131
88% PANTHER PTHR13359 39S RIBOSOMAL PROTEIN L40, MITOCHONDRIAL 143/162
OG0009102162132
91% PANTHER PTHR16231 COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER 147/162
OG0009103162130
90% PANTHER PTHR12013 SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN 145/162
OG0009104162115
68% PANTHER PTHR45931 SI:CH211-59O9.10 110/162
OG000910516275
83% PANTHER PTHR10258 CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA 135/162
OG0009106162108
87% PANTHER PTHR14401 CENTROMERE PROTEIN K 141/162
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