Gene Family

Orthologous gene families (orthogroups) inferred by OrthoFinder across the cnidarian proteomes hosted here. Every family is annotated with the function that its member genes agree on: each Pfam domain, PANTHER family, GO term and KEGG orthology entry is counted across the family and reported with the fraction of member genes that carry it. 100% means the whole family agrees (the strict consensus); 80% and 50% are the relaxed tiers. Search below by function name, domain accession (e.g. PF00069), GO term (GO:0006355), KEGG orthology (K05111), or by family ID.

A family's gene count is the number of distinct annotated genes, counted per species. Two of the source proteomes (Alatina alata and Calvadosia cruxmelitensis) list one gene identifier on several different sequences; those extra sequences are shown separately as “sequences” where they occur, and are not counted twice towards the consensus below, because the underlying annotation is stored per gene identifier.

📊 23,302 gene families with a consensus annotation
Gene family Genes Species Consensus function (agreed on by the family's member genes)
OG00001124,011
4,012 sequences
145
89% PANTHER PTHR11003 POTASSIUM CHANNEL, SUBFAMILY K 3571/4011
OG00001134,012149
86% PANTHER PTHR10334 CYSTEINE-RICH SECRETORY PROTEIN-RELATED 3458/4012
OG00001153,992138
63% PANTHER PTHR16146 INTELECTIN 2511/3992
OG00001163,990137
52% PANTHER PTHR45992 EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED 2088/3990
OG00001173,972149
91% PANTHER PTHR11733 ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED 3597/3972
OG00001183,941142
62% Pfam PF13676 TIR_2 — TIR domain 2445/3941
OG00001193,898124
61% PANTHER PTHR36981 ZGC:195170 2359/3898
OG00001203,882135
54% GO GO:0004842 ubiquitin-protein transferase activity [Molecular Function] 2081/3882
OG00001213,879127
71% PANTHER PTHR31751 SI:CH211-108C17.2-RELATED-RELATED 2762/3879
OG00001223,831125
65% PANTHER PTHR45641 TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 2476/3831
OG00001233,820148
88% Pfam PF13499 EF-hand_7 — EF-hand domain pair 3354/3820
OG00001263,751134
51% PANTHER PTHR47018 CXC DOMAIN-CONTAINING PROTEIN-RELATED 1914/3751
OG00001273,705144
87% PANTHER PTHR10131 TNF RECEPTOR ASSOCIATED FACTOR 3218/3705
OG00001283,689119
65% PANTHER PTHR46880 RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN 2380/3689
OG00001293,670147
80% PANTHER PTHR12369 CHONDROITIN SYNTHASE 2948/3670
OG00001303,640136
53% PANTHER PTHR31912 IP13529P 1943/3640
OG00001313,606125
61% Pfam PF20700 Mutator-like transposase 2203/3606
OG00001323,572145
90% PANTHER PTHR11537 VOLTAGE-GATED POTASSIUM CHANNEL 3225/3572
OG00001333,552149
67% PANTHER PTHR25462 BONUS, ISOFORM C-RELATED 2383/3552
OG00001343,530127
63% PANTHER PTHR47642 ATP-DEPENDENT DNA HELICASE 2234/3530
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