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Support counts the member genes carrying the term. % of genes is that count over all 6,125 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13710 | DNA HELICASE RECQ FAMILY MEMBER | 4587 / 6,125 | 74.9% | 99.5% of 4,608 | ≥50% support |
| GO | GO:0005694 Cellular Component | chromosome | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0006281 Biological Process | DNA repair | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0006310 Biological Process | DNA recombination | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0009378 Molecular Function | four-way junction helicase activity | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0032508 Biological Process | DNA duplex unwinding | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0043138 Molecular Function | 3'-5' DNA helicase activity | 4577 / 6,125 | 74.7% | 98.5% of 4,648 | ≥50% support |
| GO | GO:0000724 Biological Process | double-strand break repair via homologous recombination | 4551 / 6,125 | 74.3% | 97.9% of 4,648 | ≥50% support |
| GO | GO:0006268 Biological Process | DNA unwinding involved in DNA replication | 4551 / 6,125 | 74.3% | 97.9% of 4,648 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 4430 / 6,125 | 72.3% | 95.3% of 4,648 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Aurelia coerulea | evm.model.ptg000003l.1069 | CAB4006193.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | O94761 ATP-dependent DNA helicase Q4 OS=Homo sapiens OX=9606 GN=REC | JBrowse |
| Aurelia coerulea | evm.model.ptg000003l.1073 | CAB4006193.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | O94761 ATP-dependent DNA helicase Q4 OS=Homo sapiens OX=9606 GN=REC | JBrowse |
| Aurelia coerulea | evm.model.ptg000003l.1451 | none | – | JBrowse | |
| Aurelia coerulea | evm.model.ptg000004l.287 | CAB4021813.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | Q19546 ATP-dependent helicase wrn-1 OS=Caenorhabditis elegans OX=62 | JBrowse |
| Aurelia coerulea | evm.model.ptg000004l.505 | CAB3999996.1 | mediator of RNA polymerase II transcription subunit 34-like [Paramuricea clavata] | Q5UPX0 Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba pol | JBrowse |
| Aurelia coerulea | evm.model.ptg000004l.519 | XP_011679956.2 | probable Werner syndrome ATP-dependent helicase homolog 1 [Strongylocentrotus purpuratus] | P0CT33 ATP-dependent DNA helicase tlh1 (Fragment) OS=Schizosaccharo | JBrowse |
| Aurelia coerulea | evm.model.ptg000004l.520 | CAH3142620.1 | unnamed protein product, partial [Porites evermanni] | D4ACP5 ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 | JBrowse |
| Aurelia coerulea | evm.model.ptg000004l.525 | none | – | JBrowse | |
| Aurelia coerulea | evm.model.ptg000004l.538 | CAB4011762.1 | ATP-dependent DNA helicase -like [Paramuricea clavata] | Q5UPX0 Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba pol | JBrowse |
| Aurelia coerulea | evm.model.ptg000009l.614 | XP_019644099.1 | PREDICTED: uncharacterized protein LOC109485106 isoform X2 [Branchiostoma belcheri] | P50729 Probable ATP-dependent DNA helicase RecS OS=Bacillus subtili | JBrowse |
| Aurelia coerulea | evm.model.ptg000009l.774 | CAB4027369.1 | apoptosis-resistant E3 ubiquitin ligase 1 isoform X1 [Paramuricea clavata] | Q9FT72 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana | JBrowse |
| Aurelia coerulea | evm.model.ptg000009l.808 | CAA3022344.1 | ATP-dependent DNA helicase -like isoform X1 [Olea europaea subsp. europaea] | P35187 ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (str | JBrowse |
| Aurelia coerulea | evm.model.ptg000009l.939 | CAB3980649.1 | Werner syndrome ATP-dependent helicase-like [Paramuricea clavata] | Q9FT70 ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana | JBrowse |
| Aurelia coerulea | evm.model.ptg000009l.949 | CAB3980649.1 | Werner syndrome ATP-dependent helicase-like [Paramuricea clavata] | Q9FT70 ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana | JBrowse |
| Aurelia coerulea | evm.model.ptg000014l.1040 | none | – | JBrowse | |
| Aurelia coerulea | evm.model.ptg000014l.1079 | CAB4001098.1 | mediator of RNA polymerase II transcription subunit 34-like, partial [Paramuricea clavata] | P0CT33 ATP-dependent DNA helicase tlh1 (Fragment) OS=Schizosaccharo | JBrowse |
| Aurelia coerulea | evm.model.ptg000014l.1080 | XP_011679956.2 | probable Werner syndrome ATP-dependent helicase homolog 1 [Strongylocentrotus purpuratus] | – | JBrowse |
| Aurelia coerulea | evm.model.ptg000014l.1081 | XP_044173897.1 | ATP-dependent DNA helicase Q-like 2 [Acropora millepora] | – | JBrowse |
| Aurelia coerulea | evm.model.ptg000014l.1091 | MCG8623522.1 | DEAD/DEAH box helicase [Pseudomonadota bacterium] | P50729 Probable ATP-dependent DNA helicase RecS OS=Bacillus subtili | JBrowse |
| Aurelia coerulea | evm.model.ptg000014l.1123 | VDI69574.1 | ATP-dependent DNA helicase RecQ [Mytilus galloprovincialis] | O34748 ATP-dependent DNA helicase RecQ OS=Bacillus subtilis (strain | JBrowse |
