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Support counts the member genes carrying the term. % of genes is that count over all 5,276 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10131 | TNF RECEPTOR ASSOCIATED FACTOR | 4191 / 5,276 | 79.4% | 97.8% of 4,287 | ≥50% support |
| Pfam | PF02176 | zf-TRAF — TRAF-type zinc finger | 3285 / 5,276 | 62.3% | 73.4% of 4,473 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 3435 / 5,276 | 65.1% | 78.3% of 4,389 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 2653 / 5,276 | 50.3% | 60.5% of 4,389 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora cytherea | acyt_s0014.g155.t1 | XP_029186974.2 | TNF receptor-associated factor 4-like isoform X1 [Acropora millepora] | Q9BUZ4 TNF receptor-associated factor 4 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora cytherea | acyt_s0014.g156.t1 | XP_015778037.1 | PREDICTED: TNF receptor-associated factor 5-like [Acropora digitifera] | Q61382 TNF receptor-associated factor 4 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora cytherea | acyt_s0026.g71.t1 | XP_029189390.2 | TNF receptor-associated factor 5-like [Acropora millepora] | Q5RKG6 E3 ubiquitin-protein ligase TRIM35 OS=Rattus norvegicus OX=1 | JBrowse |
| Acropora cytherea | acyt_s0026.g71.t2 | XP_029189390.2 | TNF receptor-associated factor 5-like [Acropora millepora] | Q8C006 E3 ubiquitin-protein ligase TRIM35 OS=Mus musculus OX=10090 | JBrowse |
| Acropora cytherea | acyt_s0026.g72.t1 | XP_044162867.1 | TNF receptor-associated factor 5-like [Acropora millepora] | P70191 TNF receptor-associated factor 5 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora cytherea | acyt_s0026.g73.t1 | XP_029189345.2 | TNF receptor-associated factor 6-like [Acropora millepora] | – | JBrowse |
| Acropora cytherea | acyt_s0026.g74.t1 | XP_029189344.2 | TNF receptor-associated factor 5-like [Acropora millepora] | Q3MV19 TNF receptor-associated factor 6-A OS=Xenopus laevis OX=8355 | JBrowse |
| Acropora cytherea | acyt_s0029.g68.t1 | XP_029188154.1 | TNF receptor-associated factor 4-like [Acropora millepora] | Q61382 TNF receptor-associated factor 4 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora cytherea | acyt_s0054.g48.t1 | XP_029207543.2 | TNF receptor-associated factor 5-like [Acropora millepora] | Q61382 TNF receptor-associated factor 4 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora cytherea | acyt_s0064.g53.t1 | XP_015778780.1 | PREDICTED: TNF receptor-associated factor 4-like isoform X2 [Acropora digitifera] | P70191 TNF receptor-associated factor 5 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora cytherea | acyt_s0081.g17.t1 | XP_015748964.1 | PREDICTED: TNF receptor-associated factor 6-like, partial [Acropora digitifera] | Q60803 TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora cytherea | acyt_s0081.g18.t1 | CAH3119869.1 | unnamed protein product [Pocillopora meandrina] | Q60803 TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora cytherea | acyt_s0112.g60.t1 | XP_029191049.2 | TNF receptor-associated factor 4-like isoform X1 [Acropora millepora] | Q61382 TNF receptor-associated factor 4 OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora cytherea | acyt_s0112.g62.t1 | XP_015776101.1 | PREDICTED: TNF receptor-associated factor 6-like [Acropora digitifera] | – | JBrowse |
| Acropora cytherea | acyt_s0246.g56.t1 | XP_044163212.1 | TNF receptor-associated factor 6-like isoform X1 [Acropora millepora] | Q6DJN2 TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 | JBrowse |
| Acropora cytherea | acyt_s0380.g7.t1 | XP_015750365.1 | PREDICTED: TNF receptor-associated factor 3-like [Acropora digitifera] | Q54FD5 TNF receptor-associated factor family protein DDB_G0290931 O | JBrowse |
| Acropora cytherea | acyt_s0380.g7.t2 | XP_015750365.1 | PREDICTED: TNF receptor-associated factor 3-like [Acropora digitifera] | Q54FD5 TNF receptor-associated factor family protein DDB_G0290931 O | JBrowse |
| Acropora cytherea | acyt_s0844.g1.t1 | XP_029186973.2 | TNF receptor-associated factor 5-like [Acropora millepora] | Q12933 TNF receptor-associated factor 2 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora cytherea | acyt_s2452.g1.t1 | XP_044162867.1 | TNF receptor-associated factor 5-like [Acropora millepora] | – | JBrowse |
