← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 290 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00622 | SPRY | 194 / 290 | 66.9% | 82.9% of 234 | ≥50% support |
| Pfam | PF00270 | DEAD | 192 / 290 | 66.2% | 82.1% of 234 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 183 / 290 | 63.1% | 78.2% of 234 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 195 / 290 | 67.2% | 85.9% of 227 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 193 / 290 | 66.6% | 85.0% of 227 | ≥50% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 192 / 290 | 66.2% | 84.6% of 227 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 192 / 290 | 66.2% | 84.6% of 227 | ≥50% support |
| KEGG | K13177 | DDX1 — Transfer RNA biogenesis | 161 / 290 | 55.5% | 98.2% of 164 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora cytherea | acyt_s0112.g78.t1 | XP_029191099.2 | ATP-dependent RNA helicase DDX1-like isoform X1 [Acropora millepora] | Q5XH91 ATP-dependent RNA helicase DDX1 OS=Xenopus tropicalis OX=836 | JBrowse |
| Acropora cytherea | acyt_s0112.g78.t2 | XP_029191099.2 | ATP-dependent RNA helicase DDX1-like isoform X1 [Acropora millepora] | Q5XH91 ATP-dependent RNA helicase DDX1 OS=Xenopus tropicalis OX=836 | JBrowse |
| Acropora cytherea | acyt_s0112.g78.t3 | XP_029191099.2 | ATP-dependent RNA helicase DDX1-like isoform X1 [Acropora millepora] | Q5XH91 ATP-dependent RNA helicase DDX1 OS=Xenopus tropicalis OX=836 | JBrowse |
