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Support counts the member genes carrying the term. % of genes is that count over all 6,134 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10877 | POLYCYSTIN FAMILY MEMBER | 4003 / 6,134 | 65.3% | 75.5% of 5,299 | ≥50% support |
| Pfam | PF01477 | PLAT | 3714 / 6,134 | 60.6% | 69.0% of 5,381 | ≥50% support |
| Pfam | PF02010 | REJ | 3697 / 6,134 | 60.3% | 68.7% of 5,381 | ≥50% support |
| Pfam | PF20519 | Polycystin_dom — Polycystin domain | 3684 / 6,134 | 60.1% | 68.5% of 5,381 | ≥50% support |
| Pfam | PF08016 | PKD_channel — Polycystin cation channel | 3596 / 6,134 | 58.6% | 66.8% of 5,381 | ≥50% support |
| GO | GO:0016020 Cellular Component | membrane | 4122 / 6,134 | 67.2% | 80.7% of 5,110 | ≥50% support |
| GO | GO:0005262 Molecular Function | calcium channel activity | 3931 / 6,134 | 64.1% | 76.9% of 5,110 | ≥50% support |
| GO | GO:0050982 Biological Process | detection of mechanical stimulus | 3931 / 6,134 | 64.1% | 76.9% of 5,110 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 3839 / 6,134 | 62.6% | 75.1% of 5,110 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora hemprichii | Ahemp_005227-T1 | XP_044177255.1 | LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2 [Acropora millepora] | Q2EG98 Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1 | JBrowse |
| Acropora hemprichii | Ahemp_005228-T1 | XP_044176657.1 | EGF-like repeat and discoidin I-like domain-containing protein 3 [Acropora millepora] | – | JBrowse |
| Acropora hemprichii | Ahemp_006058-T1 | XP_029193852.2 | uncharacterized protein LOC114959861 [Acropora millepora] | Q7TN88 Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1 | JBrowse |
| Acropora hemprichii | Ahemp_010404-T1 | XP_029184400.2 | LOW QUALITY PROTEIN: uncharacterized protein LOC114952597 [Acropora millepora] | Q7TN88 Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1 | JBrowse |
| Acropora hemprichii | Ahemp_011012-T1 | XP_029194885.2 | polycystin-1-like [Acropora millepora] | – | JBrowse |
| Acropora hemprichii | Ahemp_011013-T1 | XP_029194885.2 | polycystin-1-like [Acropora millepora] | Q7Z442 Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L | JBrowse |
| Acropora hemprichii | Ahemp_011600-T1 | XP_044184833.1 | LOW QUALITY PROTEIN: polycystin-1-like [Acropora millepora] | Q7Z442 Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L | JBrowse |
| Acropora hemprichii | Ahemp_011601-T1 | XP_044184833.1 | LOW QUALITY PROTEIN: polycystin-1-like [Acropora millepora] | – | JBrowse |
| Acropora hemprichii | Ahemp_011607-T1 | XP_044183983.1 | uncharacterized protein LOC114958589 [Acropora millepora] | – | JBrowse |
| Acropora hemprichii | Ahemp_011608-T1 | XP_044183983.1 | uncharacterized protein LOC114958589 [Acropora millepora] | Q7Z442 Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L | JBrowse |
| Acropora hemprichii | Ahemp_011610-T1 | XP_044183975.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC122964471 [Acropora millepora] | – | JBrowse |
| Acropora hemprichii | Ahemp_011633-T1 | XP_015776970.1 | PREDICTED: polycystic kidney disease protein 1-like 2 isoform X1 [Acropora digitifera] | Q7TN88 Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1 | JBrowse |
| Acropora hemprichii | Ahemp_011634-T1 | XP_029192260.2 | LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2 [Acropora millepora] | – | JBrowse |
| Acropora hemprichii | Ahemp_015630-T1 | XP_044168837.1 | LOW QUALITY PROTEIN: polycystic kidney disease and receptor for egg jelly-related protein-like [Acropora millepora] | Q7TN88 Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1 | JBrowse |
| Acropora hemprichii | Ahemp_015779-T2 | XP_015778496.1 | PREDICTED: polycystic kidney disease protein 1-like 2 [Acropora digitifera] | Q7TN88 Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1 | JBrowse |
| Acropora hemprichii | Ahemp_015839-T1 | XP_044184852.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC114959305 [Acropora millepora] | Q7Z442 Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L | JBrowse |
| Acropora hemprichii | Ahemp_015954-T1 | XP_044185182.1 | uncharacterized protein LOC114977538 [Acropora millepora] | Q9Z0T6 Polycystin family receptor for egg jelly OS=Mus musculus OX= | JBrowse |
| Acropora hemprichii | Ahemp_015956-T1 | XP_029214101.2 | uncharacterized protein LOC114977530 [Acropora millepora] | B8UU59 Polycystin-1-related protein (Fragment) OS=Acropora millepor | JBrowse |
| Acropora hemprichii | Ahemp_015957-T1 | XP_029214102.2 | polycystic kidney disease protein 1-like 2 [Acropora millepora] | Q7Z443 Polycystin-1-like protein 3 OS=Homo sapiens OX=9606 GN=PKD1L | JBrowse |
| Acropora hemprichii | Ahemp_015959-T1 | XP_029214102.2 | polycystic kidney disease protein 1-like 2 [Acropora millepora] | Q9U1S7 Polycystin-2 OS=Caenorhabditis elegans OX=6239 GN=pkd-2 PE=1 | JBrowse |
