← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 6,123 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF01391 | Collagen | 4204 / 6,123 | 68.7% | 99.8% of 4,214 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora hemprichii | Ahemp_015447-T1 | XP_029204518.2 | collagen triple helix repeat-containing protein 1-like [Acropora millepora] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_016532-T1 | XP_044166919.1 | collagen triple helix repeat-containing protein 1-like isoform X1 [Acropora millepora] | – | JBrowse |
| Acropora hemprichii | Ahemp_016533-T1 | XP_044166919.1 | collagen triple helix repeat-containing protein 1-like isoform X1 [Acropora millepora] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_026072-T1 | XP_029203556.2 | collagen triple helix repeat-containing protein 1-like [Acropora millepora] | – | JBrowse |
| Acropora hemprichii | Ahemp_028920-T1 | XP_015753126.1 | PREDICTED: collagen triple helix repeat-containing protein 1-like isoform X2 [Acropora digitifera] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029005-T1 | XP_015753120.1 | PREDICTED: collagen triple helix repeat-containing protein 1-like [Acropora digitifera] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029564-T1 | XP_015753054.1 | PREDICTED: collagen alpha-1(XVII) chain-like [Acropora digitifera] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029619-T1 | XP_044173800.1 | collagen triple helix repeat-containing protein 1-like [Acropora millepora] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029620-T1 | XP_029212368.2 | collagen triple helix repeat-containing protein 1-like [Acropora millepora] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029621-T1 | XP_015776904.1 | PREDICTED: collagen triple helix repeat-containing protein 1-like [Acropora digitifera] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029740-T1 | XP_029203556.2 | collagen triple helix repeat-containing protein 1-like [Acropora millepora] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029754-T1 | XP_015753126.1 | PREDICTED: collagen triple helix repeat-containing protein 1-like isoform X2 [Acropora digitifera] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029755-T1 | XP_015753122.1 | PREDICTED: collagen triple helix repeat-containing protein 1-like [Acropora digitifera] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029756-T1 | XP_015753122.1 | PREDICTED: collagen triple helix repeat-containing protein 1-like [Acropora digitifera] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_029757-T1 | XP_015753054.1 | PREDICTED: collagen alpha-1(XVII) chain-like [Acropora digitifera] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_030070-T1 | XP_015753122.1 | PREDICTED: collagen triple helix repeat-containing protein 1-like [Acropora digitifera] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_030258-T1 | XP_015753123.1 | PREDICTED: collagen triple helix repeat-containing protein 1-like [Acropora digitifera] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
| Acropora hemprichii | Ahemp_030369-T1 | XP_044164599.1 | collagen triple helix repeat-containing protein 1-like [Acropora millepora] | Q96CG8 Collagen triple helix repeat-containing protein 1 OS=Homo sa | JBrowse |
