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Support counts the member genes carrying the term. % of genes is that count over all 679 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10543 | BETA-CAROTENE DIOXYGENASE | 591 / 679 | 87.0% | 99.7% of 593 | ≥80% support |
| Pfam | PF03055 | RPE65 — Retinal pigment epithelial membrane protein | 598 / 679 | 88.1% | 100.0% of 598 | ≥80% support |
| GO | GO:0016702 Molecular Function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 598 / 679 | 88.1% | 100.0% of 598 | ≥80% support |
| GO | GO:0010436 Molecular Function | carotenoid dioxygenase activity | 588 / 679 | 86.6% | 98.3% of 598 | ≥80% support |
| GO | GO:0016121 Biological Process | carotene catabolic process | 588 / 679 | 86.6% | 98.3% of 598 | ≥80% support |
| GO | GO:0003834 Molecular Function | beta-carotene 15,15'-dioxygenase activity | 578 / 679 | 85.1% | 96.7% of 598 | ≥80% support |
| GO | GO:0004744 Molecular Function | obsolete retinal isomerase activity | 578 / 679 | 85.1% | 96.7% of 598 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora hemprichii | Ahemp_001989-T1 | XP_029204228.2 | beta,beta-carotene 15,15'-dioxygenase-like isoform X4 [Acropora millepora] | Q99NF1 Carotenoid-cleaving dioxygenase, mitochondrial OS=Mus muscul | JBrowse |
| Acropora hemprichii | Ahemp_001990-T1 | XP_015751763.1 | PREDICTED: beta,beta-carotene 15,15'-dioxygenase-like [Acropora digitifera] | Q9I993 Beta,beta-carotene 15,15'-dioxygenase OS=Gallus gallus OX=90 | JBrowse |
| Acropora hemprichii | Ahemp_005071-T1 | XP_029189808.2 | beta,beta-carotene 9',10'-oxygenase-like [Acropora millepora] | Q99NF1 Carotenoid-cleaving dioxygenase, mitochondrial OS=Mus muscul | JBrowse |
| Acropora hemprichii | Ahemp_005072-T1 | XP_044169549.1 | retinoid isomerohydrolase-like [Acropora millepora] | Q9I993 Beta,beta-carotene 15,15'-dioxygenase OS=Gallus gallus OX=90 | JBrowse |
| Acropora hemprichii | Ahemp_005073-T1 | XP_029189812.2 | all-trans-retinyl ester 13-cis isomerohydrolase-like isoform X2 [Acropora millepora] | Q8AXN9 Retinoid isomerohydrolase OS=Cynops pyrrhogaster OX=8330 GN= | JBrowse |
| Acropora hemprichii | Ahemp_005074-T1 | XP_029189812.2 | all-trans-retinyl ester 13-cis isomerohydrolase-like isoform X2 [Acropora millepora] | Q8VY26 Carotenoid cleavage dioxygenase 8, chloroplastic OS=Arabidop | JBrowse |
| Acropora hemprichii | Ahemp_005075-T1 | XP_015773148.1 | PREDICTED: retinoid isomerohydrolase-like isoform X1 [Acropora digitifera] | A9C3R9 All-trans-retinyl ester 13-cis isomerohydrolase OS=Danio rer | JBrowse |
| Acropora hemprichii | Ahemp_010897-T1 | XP_044163092.1 | retinoid isomerohydrolase-like [Acropora millepora] | Q6QT07 Carotenoid-cleaving dioxygenase, mitochondrial OS=Mustela pu | JBrowse |
| Acropora hemprichii | Ahemp_010898-T1 | XP_029207420.2 | retinoid isomerohydrolase-like [Acropora millepora] | Q9XT71 Retinoid isomerohydrolase OS=Chlorocebus aethiops OX=9534 GN | JBrowse |
